RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 LRRC27Q9C0I9 530 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 PICK1Q9NRD5 415 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
TPM3-202ENST00000302206 RABGAP1Q9Y3P9 1069 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
TPM3-202ENST00000302206 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 C19orf81C9J6K1 198 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 AOC2O75106 756 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 MSNP26038 577 aaKnown RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 CDC25AP30304 524 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 GRB10Q13322 594 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 CUL4BQ13620 913 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 TMEM119Q4V9L6 283 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 ZNF658Q5TYW1 1059 aaPredicted RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 KRT79Q5XKE5 535 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 CCDC47Q96A33 483 aaKnown RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 P2RX7Q99572 595 aaKnown RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 HSD3B7Q9H2F3 369 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 TTC12Q9H892 705 aaPredicted RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 MAP3K20Q9NYL2 800 aaKnown RBP13.49□□□□□ -0.25
TPM3-202ENST00000302206 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
TPM3-202ENST00000302206 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 ZNF500O60304 480 aaPredicted RBP13.48□□□□□ -0.25
TPM3-202ENST00000302206 MARCH6O60337 910 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 PTPRAP18433 802 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 CLCN1P35523 988 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 PPP1R2P41236 205 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 HSD17B4P51659 736 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 BACE1P56817 501 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 CCDC174Q6PII3 467 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
TPM3-202ENST00000302206 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 ZNF280CQ8ND82 737 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 ETNPPLQ8TBG4 499 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 PNMA5Q96PV4 448 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 WRNIP1Q96S55 665 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 MAF1Q9H063 256 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 RRAGDQ9NQL2 400 aaPredicted RBP13.48□□□□□ -0.25
TPM3-202ENST00000302206 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
TPM3-202ENST00000302206 IMPACTQ9P2X3 320 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
TPM3-202ENST00000302206 SSC5DA1L4H1 1573 aa13.48□□□□□ -0.25
TPM3-202ENST00000302206 ZNF536O15090 1300 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 KLRC4O43908 158 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 ZNF18P17022 549 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 VCAM1P19320 739 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 FANCCQ00597 558 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 MTMR2Q13614 643 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 CST9Q5W186 159 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
TPM3-202ENST00000302206 SV2BQ7L1I2 683 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 DRC7Q8IY82 874 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 LENG9Q96B70 501 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 CCPG1Q9ULG6 757 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPM3-202ENST00000302206 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
TPM3-202ENST00000302206 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 ZBED4O75132 1171 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 CASP1P29466 404 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 SPP2Q13103 211 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 SPC24Q8NBT2 197 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 LRRC15Q8TF66 581 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.25
TPM3-202ENST00000302206 RAD54LQ92698 747 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 STAMQ92783 540 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 TRIM9Q9C026 710 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.25
TPM3-202ENST00000302206 BLOC1S4Q9NUP1 217 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 FANCLQ9NW38 375 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 RWDD2AQ9UIY3 292 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
TPM3-202ENST00000302206 MYPNQ86TC9 1320 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 POTEMA6NI47 508 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 CFBP00751 764 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
TPM3-202ENST00000302206 OAZ1P54368 228 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 GSDMDP57764 484 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 KMT5BQ4FZB7 885 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 SH3D19Q5HYK7 790 aa13.45□□□□□ -0.26
TPM3-202ENST00000302206 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms