RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
TSR1-201ENST00000301364 ZNF354CQ86Y25 554 aa21.1■□□□□ 0.97
TSR1-201ENST00000301364 DAAM1Q9Y4D1 1078 aa21.1■□□□□ 0.97
TSR1-201ENST00000301364 LRCH2Q5VUJ6 765 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 KIAA0825Q8IV33 1275 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 SLC17A8Q8NDX2 589 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 DEPTORQ8TB45 409 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 ARHGEF2Q92974 986 aaKnown RBP21.09■□□□□ 0.97
TSR1-201ENST00000301364 I3L4J1 428 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 GNPTABQ3T906 1256 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 ABCA9Q8IUA7 1624 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 HSPA6P17066 643 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 MAN1A1P33908 653 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 ADAT2Q7Z6V5 191 aaKnown RBP21.09■□□□□ 0.97
TSR1-201ENST00000301364 DYNLL2Q96FJ2 89 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 SSX2IPQ9Y2D8 614 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
TSR1-201ENST00000301364 PABPN1LA6NDY0 278 aaKnown RBP21.09■□□□□ 0.97
TSR1-201ENST00000301364 TROVE2P10155 538 aaKnown RBP eCLIP21.09■□□□□ 0.97
TSR1-201ENST00000301364 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
TSR1-201ENST00000301364 MAGOHBQ96A72 148 aaKnown RBP21.08■□□□□ 0.97
TSR1-201ENST00000301364 MYO3AQ8NEV4 1616 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 THAP12O43422 761 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 BPIFB4P59827 614 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 ATG9AQ7Z3C6 839 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 FAM133AQ8N9E0 248 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 COA7Q96BR5 231 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 KCNF1Q9H3M0 494 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 CXCR5P32302 372 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 PHBP35232 272 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 NAA35Q5VZE5 725 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 WDR11Q9BZH6 1224 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.08■□□□□ 0.97
TSR1-201ENST00000301364 USP21Q9UK80 565 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 ADGRG1Q9Y653 693 aa21.08■□□□□ 0.97
TSR1-201ENST00000301364 CCDC160A6NGH7 325 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 ENAHQ8N8S7 591 aaPredicted RBP21.08■□□□□ 0.96
TSR1-201ENST00000301364 ANAPC4Q9UJX5 808 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 PPIP5K2O43314 1243 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 POLD1P28340 1107 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 MFAP3P55082 362 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 UNC13DQ70J99 1090 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 VPS52Q8N1B4 723 aa21.08■□□□□ 0.96
TSR1-201ENST00000301364 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.08■□□□□ 0.96
TSR1-201ENST00000301364 MORC2Q9Y6X9 1032 aaPredicted RBP21.08■□□□□ 0.96
TSR1-201ENST00000301364 A0A087WUV0 522 aaPredicted RBP21.07■□□□□ 0.96
TSR1-201ENST00000301364 LIG4P49917 911 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 GLE1Q53GS7 698 aaKnown RBP21.07■□□□□ 0.96
TSR1-201ENST00000301364 ARMC9Q7Z3E5 817 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 USP17L3A6NCW0 530 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 USP17L4A6NCW7 530 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 IFNB1P01574 187 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 MAP2K2P36507 400 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 USP17L1Q7RTZ2 530 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 OXER1Q8TDS5 423 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 FTCDO95954 541 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 PLA2G4BP0C869 781 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 CCDC13Q8IYE1 715 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 CCDC127Q96BQ5 260 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 IQGAP1P46940 1657 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 OVOS2A0A0J9YW53 1432 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 OVOS2Q6IE36 1432 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 TESPA1A2RU30 521 aaPredicted RBP21.07■□□□□ 0.96
TSR1-201ENST00000301364 KIF28PB7ZC32 967 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 ATF2P15336 505 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 SLC8A1P32418 973 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 DOK7Q18PE1 504 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 ADAM21Q9UKJ8 722 aa21.07■□□□□ 0.96
TSR1-201ENST00000301364 ALAS1P13196 640 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 DMP1Q13316 513 aaPredicted RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 CCDC97Q96F63 343 aaPredicted RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 STK32BQ9NY57 414 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 THRAP3Q9Y2W1 955 aaKnown RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 NSFP46459 744 aaKnown RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 CDK8P49336 464 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 RSAD2Q8WXG1 361 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 RAB3IPQ96QF0 476 aaPredicted RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 NACC1Q96RE7 527 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 INTS9Q9NV88 658 aaKnown RBP21.06■□□□□ 0.96
TSR1-201ENST00000301364 ZNF609O15014 1411 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 PNMA6FA0A0J9YX94 578 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 GSG1L2A8MUP6 293 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 SF3A3Q12874 501 aaKnown RBP eCLIP21.06■□□□□ 0.964e-7■■■□□ 15
TSR1-201ENST00000301364 TNFAIP1Q13829 316 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 NT5C1BQ96P26 610 aa21.06■□□□□ 0.96
TSR1-201ENST00000301364 HSPA1LP34931 641 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 NNTQ13423 1086 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 MESDQ14696 234 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 HADHQ16836 314 aaKnown RBP21.05■□□□□ 0.96
TSR1-201ENST00000301364 ARHGEF16Q5VV41 709 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 FLAD1Q8NFF5 587 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 MYO1FO00160 1098 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 P4HA1P13674 534 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 PTK2Q05397 1052 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 ORC2Q13416 577 aaPredicted RBP21.05■□□□□ 0.96
TSR1-201ENST00000301364 PALM2Q8IXS6 379 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 TRPC6Q9Y210 931 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 PVALEFA0A1B0GWK0 134 aa21.05■□□□□ 0.96
TSR1-201ENST00000301364 PRR29P0C7W0 189 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms