RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CCP110O43303 1012 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 LRRC41Q15345 812 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 TTLL6Q8N841 843 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 WDR24Q96S15 920 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 C7orf25Q9BPX7 421 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 FEZ2Q9UHY8 353 aaPredicted RBP24.48■■□□□ 1.51
TPM4-201ENST00000300933 H7C1D1 291 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 MFAP3LO75121 409 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 FXR2P51116 673 aaKnown RBP eCLIP24.48■■□□□ 1.512e-7■□□□□ 10.7
TPM4-201ENST00000300933 FKBP1AP62942 108 aaKnown RBP24.48■■□□□ 1.51
TPM4-201ENST00000300933 SMC1AQ14683 1233 aaKnown RBP24.48■■□□□ 1.51
TPM4-201ENST00000300933 LARP4BQ92615 738 aaKnown RBP24.48■■□□□ 1.51
TPM4-201ENST00000300933 PCDHA12Q9UN75 941 aa24.48■■□□□ 1.51
TPM4-201ENST00000300933 CACNB1Q02641 598 aaPredicted RBP24.47■■□□□ 1.51
TPM4-201ENST00000300933 STIM1Q13586 685 aa24.47■■□□□ 1.51
TPM4-201ENST00000300933 KRT79Q5XKE5 535 aa24.47■■□□□ 1.51
TPM4-201ENST00000300933 SLC30A10Q6XR72 485 aa24.47■■□□□ 1.51
TPM4-201ENST00000300933 MEIS2O14770 477 aa24.47■■□□□ 1.51
TPM4-201ENST00000300933 CC2D1AQ6P1N0 951 aaPredicted RBP24.47■■□□□ 1.51
TPM4-201ENST00000300933 ZFP91Q96JP5 570 aaPredicted RBP24.47■■□□□ 1.51
TPM4-201ENST00000300933 B4DLN1 442 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 KLK7P49862 253 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 GNG11P61952 73 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 TXLNBQ8N3L3 684 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 ANKRD20A12PQ8NF67 263 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 DCAF4Q8WV16 495 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 TMEM39BQ9GZU3 492 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 TBC1D7Q9P0N9 293 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 ATF5Q9Y2D1 282 aaPredicted RBP24.46■■□□□ 1.51
TPM4-201ENST00000300933 TNS1Q9HBL0 1735 aaKnown RBP24.46■■□□□ 1.51
TPM4-201ENST00000300933 SHTN1A0MZ66 631 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 ANO3Q9BYT9 981 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 CUEDC2Q9H467 287 aa24.46■■□□□ 1.51
TPM4-201ENST00000300933 SPDYE2BA6NHP3 402 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 ZSCAN12O43309 604 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 ABL1P00519 1130 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 SPDYE6P0CI01 402 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 PPP4R3AQ6IN85 833 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 GREB1LQ9C091 1923 aaPredicted RBP24.45■■□□□ 1.5
TPM4-201ENST00000300933 PRR16Q569H4 304 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 PPP1R18Q6NYC8 613 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 RSBN1LQ6PCB5 846 aaPredicted RBP24.45■■□□□ 1.5
TPM4-201ENST00000300933 GPIHBP1Q8IV16 184 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 DDX12PQ92771 950 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 P2RX5Q93086 422 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 PANX2Q96RD6 677 aa24.45■■□□□ 1.5
TPM4-201ENST00000300933 E9PMD0 336 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 CASQ1P31415 396 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 AMPD3Q01432 767 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 DLGAP5Q15398 846 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 CYP2W1Q8TAV3 490 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 SEMA6BQ9H3T3 888 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 NPHP3-ACAD11A0A0J9YXS1 232 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 BMP3P12645 472 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 KCNA3P22001 575 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 SPAG1Q07617 926 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 SLC20A2Q08357 652 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 ACRBPQ8NEB7 543 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 TBC1D5Q92609 795 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 ZSWIM4Q9H7M6 989 aa24.44■■□□□ 1.5
TPM4-201ENST00000300933 ZNF70Q9UC06 446 aaPredicted RBP24.44■■□□□ 1.5
TPM4-201ENST00000300933 MYL1P05976 194 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 KRT9P35527 623 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 FCHSD1Q86WN1 690 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 RAD54LQ92698 747 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 POLD4Q9HCU8 107 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 KIAA1024Q9UPX6 916 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 COL4A5P29400 1685 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 ENTPD3O75355 529 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 ERVK-24P63145 666 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 SYDE2Q5VT97 1194 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 FBXO11Q86XK2 927 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 CHP1Q99653 195 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 AMNQ9BXJ7 453 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 RAB34Q9BZG1 259 aa24.43■■□□□ 1.5
TPM4-201ENST00000300933 POTEB3A0JP26 581 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 POTECB2RU33 542 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 TPM1P09493 284 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 PPP2R3AQ06190 1150 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 PDIA5Q14554 519 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 POTEBQ6S5H4 581 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 OGFOD1Q8N543 542 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 SUPT20HQ8NEM7 779 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 CCDC47Q96A33 483 aaKnown RBP24.42■■□□□ 1.5
TPM4-201ENST00000300933 TUBGCP2Q9BSJ2 902 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 PARD6BQ9BYG5 372 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 TMOD2Q9NZR1 351 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 MAGEC2Q9UBF1 373 aaPredicted RBP24.42■■□□□ 1.5
TPM4-201ENST00000300933 PPP1R1BQ9UD71 204 aaPredicted RBP24.42■■□□□ 1.5
TPM4-201ENST00000300933 TTC26A0AVF1 554 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 CCNE1P24864 410 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 ZSCAN26Q16670 478 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 MB21D1Q8N884 522 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 GLIS2Q9BZE0 524 aaPredicted RBP24.42■■□□□ 1.5
TPM4-201ENST00000300933 UBXN6Q9BZV1 441 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 ARFGAP3Q9NP61 516 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 ABHD10Q9NUJ1 306 aa24.42■■□□□ 1.5
TPM4-201ENST00000300933 GPS2Q13227 327 aa24.41■■□□□ 1.5
TPM4-201ENST00000300933 DHTKD1Q96HY7 919 aaPredicted RBP24.41■■□□□ 1.5
TPM4-201ENST00000300933 CNOT6LQ96LI5 555 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms