RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
SMG8-201ENST00000300917 SMCHD1A6NHR9 2005 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 H7C1D1 291 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 MFAP3LO75121 409 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 LIMA1Q9UHB6 759 aaKnown RBP16.28■□□□□ 0.2
SMG8-201ENST00000300917 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 ABL1P00519 1130 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
SMG8-201ENST00000300917 STAT2P52630 851 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 PPP1R18Q6NYC8 613 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 CNOT6LQ96LI5 555 aaKnown RBP16.28■□□□□ 0.2
SMG8-201ENST00000300917 WDR24Q96S15 920 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 TFR2Q9UP52 801 aa16.28■□□□□ 0.2
SMG8-201ENST00000300917 WNT10BO00744 389 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 STX10O60499 249 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 TPM1P09493 284 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 SAMD7Q7Z3H4 446 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 FAM151AQ8WW52 585 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 GMLQ99445 158 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 TUBGCP2Q9BSJ2 902 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 PBX1P40424 430 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 PSMC6P62333 389 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
SMG8-201ENST00000300917 NCBP1Q09161 790 aaKnown RBP16.27■□□□□ 0.2
SMG8-201ENST00000300917 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
SMG8-201ENST00000300917 CNTNAP1P78357 1384 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.19
SMG8-201ENST00000300917 OPLAHO14841 1288 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 MED24O75448 989 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 GTF2F1P35269 517 aaKnown RBP eCLIP16.27■□□□□ 0.19
SMG8-201ENST00000300917 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.19
SMG8-201ENST00000300917 JDP2Q8WYK2 163 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 CHP1Q99653 195 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 PIM2Q9P1W9 311 aa16.27■□□□□ 0.19
SMG8-201ENST00000300917 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 CCNE1P24864 410 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 SPAG1Q07617 926 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
SMG8-201ENST00000300917 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 TNS1Q9HBL0 1735 aaKnown RBP16.26■□□□□ 0.19
SMG8-201ENST00000300917 TTC26A0AVF1 554 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 TBC1D8BQ0IIM8 1120 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 CT47A1Q5JQC4 288 aaPredicted RBP16.26■□□□□ 0.19
SMG8-201ENST00000300917 CNNM4Q6P4Q7 775 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 TRIM65Q6PJ69 517 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 GPBP1Q86WP2 473 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 SLF1Q9BQI6 1058 aa16.26■□□□□ 0.19
SMG8-201ENST00000300917 SIPA1L1O43166 1804 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 RASA3Q14644 834 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 ELF2Q15723 593 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 GMCL1Q96IK5 515 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
SMG8-201ENST00000300917 ZSWIM4Q9H7M6 989 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 ERVK-24P63145 666 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 SYCP1Q15431 976 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 CCDC155Q8N6L0 562 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 MB21D1Q8N884 522 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 GMCL1P1Q8NEA9 526 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 PSMD1Q99460 953 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 HERC5Q9UII4 1024 aaKnown RBP16.25■□□□□ 0.19
SMG8-201ENST00000300917 QSER1Q2KHR3 1735 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 TRIM21P19474 475 aaKnown RBP16.25■□□□□ 0.19
SMG8-201ENST00000300917 RASSF7Q02833 373 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 PDIA5Q14554 519 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 AGPAT5Q9NUQ2 364 aa16.25■□□□□ 0.19
SMG8-201ENST00000300917 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
SMG8-201ENST00000300917 PLA2G4BP0C869 781 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 HERC4Q5GLZ8 1057 aaPredicted RBP16.24■□□□□ 0.19
SMG8-201ENST00000300917 CIAPIN1Q6FI81 312 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 PAXIP1Q6ZW49 1069 aaPredicted RBP16.24■□□□□ 0.19
SMG8-201ENST00000300917 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 ATRNL1Q5VV63 1379 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
SMG8-201ENST00000300917 UNC13DQ70J99 1090 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 DHTKD1Q96HY7 919 aaPredicted RBP16.24■□□□□ 0.19
SMG8-201ENST00000300917 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 MYOZ2Q9NPC6 264 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 ABHD10Q9NUJ1 306 aa16.24■□□□□ 0.19
SMG8-201ENST00000300917 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
SMG8-201ENST00000300917 SFI1A8K8P3 1242 aa16.23■□□□□ 0.19
SMG8-201ENST00000300917 ZBTB39O15060 712 aa16.23■□□□□ 0.19
SMG8-201ENST00000300917 COASYQ13057 564 aa16.23■□□□□ 0.19
SMG8-201ENST00000300917 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
SMG8-201ENST00000300917 CNGA4Q8IV77 575 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms