RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 KMT5AQ9NQR1 393 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SPTLC3Q9NUV7 552 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PCDHA5Q9Y5H7 936 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PASKQ96RG2 1323 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 INHBAP08476 426 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 USP17L2Q6R6M4 530 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FAM149B1Q96BN6 582 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 INTUQ9ULD6 942 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FAM160B1Q5W0V3 765 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LRGUKQ96M69 825 aa14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 UBE2TQ9NPD8 197 aaPredicted RBP14.77□□□□□ -0.05
CHRFAM7A-201ENST00000299847 USP17L8P0C7I0 530 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HOXA13P31271 388 aaPredicted RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PLTPP55058 493 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SLFNL1Q499Z3 407 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NRBP2Q9NSY0 501 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ANAPC5Q9UJX4 755 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PZPP20742 1482 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TRIM37O94972 964 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KRT1P04264 644 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 IFT88Q13099 833 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TNFAIP1Q13829 316 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PRPSAP1Q14558 356 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 AP1M1Q9BXS5 423 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MAP3K15Q6ZN16 1313 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GARSP41250 739 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TFAMQ00059 246 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GOLGA5Q8TBA6 731 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ANKRD36BP1Q96IX9 119 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KIAA0556O60303 1618 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SFI1A8K8P3 1242 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PTK2Q05397 1052 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 THOC1Q96FV9 657 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TYW1Q9NV66 732 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SLC5A4Q9NY91 659 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KDM5AP29375 1690 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 IRX4P78413 519 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MTERF2Q49AM1 385 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 AIFM3Q96NN9 605 aa14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SAMSN1Q9NSI8 373 aaKnown RBP14.76□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TTC30BQ8N4P2 665 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SLC38A10Q9HBR0 1119 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NUB1Q9Y5A7 615 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 USP17L3A6NCW0 530 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 USP17L4A6NCW7 530 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BNIP3LO60238 219 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 USP17L1Q7RTZ2 530 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 NT5C1BQ96P26 610 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ANGPTL3Q9Y5C1 460 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RGS12O14924 1447 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 A6NNZ2 444 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 AFPP02771 609 aaKnown RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 S100BP04271 92 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 BASP1P80723 227 aaKnown RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TUBB8Q3ZCM7 444 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZBTB24O43167 697 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GCKP35557 465 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 E2F5Q15329 346 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ALKBH8Q96BT7 664 aaKnown RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 UBN1Q9NPG3 1134 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ANLNQ9NQW6 1124 aa14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ZNF277Q9NRM2 450 aaPredicted RBP14.75□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HIP1RO75146 1068 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RAD17O75943 681 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 KIF11P52732 1056 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SGO2Q562F6 1265 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CDC26Q8NHZ8 85 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 F5H423 210 aaPredicted RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LARGE1O95461 756 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 ATP6V1E2Q96A05 226 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MLH3Q9UHC1 1453 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CYP21A2P08686 494 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 PSMC2P35998 433 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CDO1Q16878 200 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 EXT2Q93063 718 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 GCNT4Q9P109 453 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 LARSQ9P2J5 1176 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MYO1FO00160 1098 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 TCP1P17987 556 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 MAP2K2P36507 400 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 CTTNQ14247 550 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 DARS2Q6PI48 645 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 HSPH1Q92598 858 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 SNX25Q9H3E2 840 aa14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
CHRFAM7A-201ENST00000299847 INTS9Q9NV88 658 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms