RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CRACR2AQ9BSW2 395 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 NOC4LQ9BVI4 516 aaKnown RBP11.25□□□□□ -0.61
FOXN4-201ENST00000299162 PARD6BQ9BYG5 372 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 MMRN2Q9H8L6 949 aa11.25□□□□□ -0.61
FOXN4-201ENST00000299162 CCP110O43303 1012 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 KLRC4O43908 158 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ARID5AQ03989 594 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ECM1Q16610 540 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CCDC174Q6PII3 467 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CUL5Q93034 780 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 KIAA1024Q9UPX6 916 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ROBO3Q96MS0 1386 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CASZ1Q86V15 1759 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 RGL2O15211 777 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 KIF5CO60282 957 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 GABPAQ06546 454 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CDC37Q16543 378 aaPredicted RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 FKBP15Q5T1M5 1219 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ABHD10Q9NUJ1 306 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 PNMA6FA0A0J9YX94 578 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 POTEB3A0JP26 581 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 POTECB2RU33 542 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ECE1P42892 770 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 JAG1P78504 1218 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 GRB10Q13322 594 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 EZH2Q15910 746 aaKnown RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CC2D1AQ6P1N0 951 aaPredicted RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 POTEBQ6S5H4 581 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 CNGA4Q8IV77 575 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 SLC35F6Q8N357 371 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 LARP4BQ92615 738 aaKnown RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 PSMB7Q99436 277 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 RIOX1Q9H6W3 641 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 KBTBD4Q9NVX7 518 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
FOXN4-201ENST00000299162 LUC7L2Q9Y383 392 aaKnown RBP11.24□□□□□ -0.61
FOXN4-201ENST00000299162 H3BQF6 201 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 ZNF76P36508 570 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
FOXN4-201ENST00000299162 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 GALNT17Q6IS24 598 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 ELOA2Q8IYF1 753 aaPredicted RBP11.23□□□□□ -0.61
FOXN4-201ENST00000299162 CYP2W1Q8TAV3 490 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 DDX12PQ92771 950 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 CAPZA3Q96KX2 299 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 MACROD2A1Z1Q3 448 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 F5H6K3 240 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 ZBTB5O15062 677 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 CFBP00751 764 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 KLRC3Q07444 240 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 KIAA0895Q8NCT3 520 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 NOC3LQ8WTT2 800 aaKnown RBP11.23□□□□□ -0.61
FOXN4-201ENST00000299162 P2RX5Q93086 422 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
FOXN4-201ENST00000299162 CCSER1Q9C0I3 900 aa11.23□□□□□ -0.61
FOXN4-201ENST00000299162 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 H7C1D1 291 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 APBA1Q02410 837 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 KIAA1328Q86T90 577 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 ANKRD13CQ8N6S4 541 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
FOXN4-201ENST00000299162 AMPD3Q01432 767 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 SPAG1Q07617 926 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 TTC31Q49AM3 519 aaPredicted RBP11.22□□□□□ -0.61
FOXN4-201ENST00000299162 HSP90B2PQ58FF3 399 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 MB21D1Q8N884 522 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 FGFBP2Q9BYJ0 223 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 BCAS3Q9H6U6 928 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 NLRC4Q9NPP4 1024 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 BLOC1S4Q9NUP1 217 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 FAN1Q9Y2M0 1017 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 JRKLQ9Y4A0 524 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 SFI1A8K8P3 1242 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 TADA3O75528 432 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 PLEKP08567 350 aaPredicted RBP11.22□□□□□ -0.61
FOXN4-201ENST00000299162 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
FOXN4-201ENST00000299162 LONRF2Q1L5Z9 754 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 KRT26Q7Z3Y9 468 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 GIMAP8Q8ND71 665 aaPredicted RBP11.22□□□□□ -0.61
FOXN4-201ENST00000299162 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
FOXN4-201ENST00000299162 DUSP9Q99956 384 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms