RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 SYMPKQ92797 1274 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 MTIF3Q9H2K0 278 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 H7C0C1 242 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 KCNA4P22459 653 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CIITAP33076 1130 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 ATP5OP48047 213 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 POLR2FP61218 127 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 TTLL4Q14679 1199 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 HLFQ16534 295 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF219Q5W0B1 726 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 SDCCAG8Q86SQ7 713 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 RASGRP4Q8TDF6 673 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 P3H4Q92791 437 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 TTC1Q99614 292 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF26Q9BY78 433 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 MEIS1O00470 390 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 DTNBO60941 627 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 KRT33BQ14525 404 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 UBE2SQ16763 222 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 KAZNQ674X7 775 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CEP57Q86XR8 500 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 PCIF1Q9H4Z3 704 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 TLR7Q9NYK1 1049 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CALCOCO1Q9P1Z2 691 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 PLEKHG2Q9H7P9 1386 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM167AQ96KS9 214 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM81BQ96LP2 452 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 PSMB7Q99436 277 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 SPDYE2BA6NHP3 402 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 KBTBD13C9JR72 458 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 SPDYE6P0CI01 402 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 NFKBIAP25963 317 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 HPDP32754 393 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 RAB17Q9H0T7 212 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 CUEDC2Q9H467 287 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 SSH2Q76I76 1423 aa7.55□□□□□ -1.2
GAPVD1-202ENST00000297933 A0A0G2JLW4 131 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 WDR46O15213 610 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 BNIP3LO60238 219 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 SLC4A1P02730 911 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GSTA1P08263 222 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GSTA2P09210 222 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 PDIA3P30101 505 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 COPB2P35606 906 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 JAK3P52333 1124 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 MTX1Q13505 466 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 EXOC3L4Q17RC7 722 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TTLL11Q8NHH1 800 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 PPP4R1Q8TF05 950 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ZBTB9Q96C00 473 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CHMP6Q96FZ7 201 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 AK8Q96MA6 479 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 VPS18Q9P253 973 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 FNDC3AQ9Y2H6 1198 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CLASP1Q7Z460 1538 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ZNF18P17022 549 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 SAT1P21673 171 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ADCY8P40145 1251 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GARSP41250 739 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TRAPPC10P48553 1259 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GKAP1Q5VSY0 366 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 HDXQ7Z353 690 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ELP3Q9H9T3 547 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ZFYVE28Q9HCC9 887 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CD209Q9NNX6 404 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 RSPH14Q9UHP6 348 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ANGPTL3Q9Y5C1 460 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 PRR36Q9H6K5 1346 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CHRNA5P30532 468 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GPSM2P81274 684 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GOLGA8FQ08AF8 430 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 GOLGA8DPQ0D2H9 430 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TWF2Q6IBS0 349 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TTBK2Q6IQ55 1244 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 KRT222Q8N1A0 295 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 STMN2Q93045 179 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 PPP2R3CQ969Q6 453 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ZFP91Q96JP5 570 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CBX8Q9HC52 389 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 IMPACTQ9P2X3 320 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 EPHB1P54762 984 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TAF1CQ15572 869 aaPredicted RBP7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 SP8Q8IXZ3 490 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 NDUFAF2Q8N183 169 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 MSTO1Q9BUK6 570 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 PLCB1Q9NQ66 1216 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 TTC37Q6PGP7 1564 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CRB1P82279 1406 aa7.54□□□□□ -1.2
GAPVD1-202ENST00000297933 CYP2D7A0A087X1C5 515 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms