RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
UBAP1-201ENST00000297661 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
UBAP1-201ENST00000297661 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
UBAP1-201ENST00000297661 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
UBAP1-201ENST00000297661 SMCO2A6NFE2 343 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.35
UBAP1-201ENST00000297661 CKAP4Q07065 602 aaKnown RBP17.27■□□□□ 0.35
UBAP1-201ENST00000297661 TTI2Q6NXR4 508 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 B4GALNT4Q76KP1 1039 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 CLEC10AQ8IUN9 316 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 DUSP9Q99956 384 aaKnown RBP17.27■□□□□ 0.35
UBAP1-201ENST00000297661 CD248Q9HCU0 757 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.35
UBAP1-201ENST00000297661 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 PALM3A6NDB9 673 aaPredicted RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 GOLGA8KD6RF30 607 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 FSBPO95073 299 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 BTDP43251 543 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 HERVK_113P62684 666 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 CYP27A1Q02318 531 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 PAPD7Q5XG87 772 aaKnown RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 SND1Q7KZF4 910 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 AENQ8WTP8 325 aaKnown RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 EYA3Q99504 573 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 TUBGCP2Q9BSJ2 902 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 FLT1P17948 1338 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 TRIM21P19474 475 aaKnown RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 ZNF507Q8TCN5 953 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
UBAP1-201ENST00000297661 JAKMIP2Q96AA8 810 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 PIGSQ96S52 555 aa17.26■□□□□ 0.35
UBAP1-201ENST00000297661 ATXN2Q99700 1313 aaKnown RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 RCCD1A6NED2 376 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 RASSF10A6NK89 507 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 MEFVO15553 781 aaPredicted RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 C21orf2O43822 256 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 BAG3O95817 575 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 SCP2P22307 547 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 TXKP42681 527 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 CCDC122Q5T0U0 273 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 RRP36Q96EU6 259 aaKnown RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 TACO1Q9BSH4 297 aaKnown RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 HAUS4Q9H6D7 363 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 TCP11L1Q9NUJ3 509 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 H0YIN7 160 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 RHOBTB3O94955 611 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 OR52Z1P0C646 297 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 SRGNP10124 158 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 CDK8P49336 464 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 GNAQP50148 359 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 PDCLQ13371 301 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 TRIM14Q14142 442 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 WDR66Q8TBY9 1149 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
UBAP1-201ENST00000297661 TRIM9Q9C026 710 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 LACRTQ9GZZ8 138 aa17.25■□□□□ 0.35
UBAP1-201ENST00000297661 PDE2AO00408 941 aaPredicted RBP17.24■□□□□ 0.35
UBAP1-201ENST00000297661 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
UBAP1-201ENST00000297661 MTIF2P46199 727 aaKnown RBP17.24■□□□□ 0.35
UBAP1-201ENST00000297661 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 NEDD9Q14511 834 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 CEP95Q96GE4 821 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 CNOT6LQ96LI5 555 aaKnown RBP17.24■□□□□ 0.35
UBAP1-201ENST00000297661 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 CCDC88AQ3V6T2 1871 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 CHUKO15111 745 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 ZNF185O15231 689 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 KCNA3P22001 575 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 C2orf54Q08AI8 447 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 DYMQ7RTS9 669 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 GJA10Q969M2 543 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
UBAP1-201ENST00000297661 CCSER1Q9C0I3 900 aa17.24■□□□□ 0.35
UBAP1-201ENST00000297661 OPA1O60313 960 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 PLEKP08567 350 aaPredicted RBP17.23■□□□□ 0.35
UBAP1-201ENST00000297661 PDE6BP35913 854 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 GPSM2P81274 684 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 SKOR1P84550 965 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 KCNB1Q14721 858 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
UBAP1-201ENST00000297661 ANKS1AQ92625 1134 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 ARL8AQ96BM9 186 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 CCDC189A1A4V9 331 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 RGL2O15211 777 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 EEF1GP26641 437 aaKnown RBP17.23■□□□□ 0.35
UBAP1-201ENST00000297661 ELF1P32519 619 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 NONOQ15233 471 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBAP1-201ENST00000297661 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
UBAP1-201ENST00000297661 P2RX5Q93086 422 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms