RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 LUC7LQ9NQ29 371 aaKnown RBP14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 ARPP21Q9UBL0 812 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 SNX12Q9UMY4 172 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 PCDHB13Q9Y5F0 798 aa14.7□□□□□ -0.06
TNFRSF21-201ENST00000296861 ERVV-1B6SEH8 477 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 CYTH3O43739 400 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 TRAPPC10P48553 1259 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 GRIK5Q16478 980 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 VWA3BQ502W6 1294 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 SFMBT2Q5VUG0 894 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 TSEN2Q8NCE0 465 aaKnown RBP14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 DDX12PQ92771 950 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZNF804BA4D1E1 1349 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 MYMKA6NI61 221 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 SFI1A8K8P3 1242 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 PSMD14O00487 310 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 CHMP2AO43633 222 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 RDXP35241 583 aaKnown RBP14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 KCTD1Q719H9 257 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 NUDT12Q9BQG2 462 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 BRIP1Q9BX63 1249 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 RAB34Q9BZG1 259 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 STIM2Q9P246 746 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 KIAA1024Q9UPX6 916 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ITIH6Q6UXX5 1313 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 C5P01031 1676 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 E9PMD0 336 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZNF263O14978 683 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ACTN1P12814 892 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 PPFIA1Q13136 1202 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 CNPY4Q8N129 248 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZNF384Q8TF68 577 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 DHTKD1Q96HY7 919 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 SCLT1Q96NL6 688 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 PACSIN1Q9BY11 444 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 IL17RBQ9NRM6 502 aa14.69□□□□□ -0.06
TNFRSF21-201ENST00000296861 ALS2Q96Q42 1657 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 FAM153BP0C7A2 387 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 CDR1P51861 262 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 TCP10Q12799 353 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 FAM153CQ494X1 144 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 USH1GQ495M9 461 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 SLC30A10Q6XR72 485 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 MTMR8Q96EF0 704 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 FAM153AQ9UHL3 310 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 CLIC2O15247 247 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 CAMTA2O94983 1202 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZNF76P36508 570 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 BTDP43251 543 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 ARL6IP4Q66PJ3 421 aaKnown RBP14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 TADA2BQ86TJ2 420 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 TICAM2Q86XR7 235 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 TSGA10Q9BZW7 698 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 SEMA6BQ9H3T3 888 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 PKD2L1Q9P0L9 805 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 ABCC6O95255 1503 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 NTSR2O95665 410 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 FGFR1OPO95684 399 aaKnown RBP14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 KRT25Q7Z3Z0 450 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 IFT20Q8IY31 132 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 ATP8A2Q9NTI2 1148 aa14.68□□□□□ -0.06
TNFRSF21-201ENST00000296861 UFL1O94874 794 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 SCNN1DP51172 638 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 CCDC25Q86WR0 208 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 ZIM3Q96PE6 472 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 SELENOSQ9BQE4 189 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 MRC1P22897 1456 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 MYO1FO00160 1098 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 TCP1P17987 556 aaKnown RBP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 STAT3P40763 770 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 PABPC4Q13310 644 aaKnown RBP eCLIP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 RCSD1Q6JBY9 416 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 INTS5Q6P9B9 1019 aaKnown RBP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 MYOCDQ8IZQ8 938 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 KIAA0895Q8NCT3 520 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 LRRC15Q8TF66 581 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 DDX47Q9H0S4 455 aaKnown RBP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 GLI1P08151 1106 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 KRT13P13646 458 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 COPB2P35606 906 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 PTF1AQ7RTS3 328 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 CCDC84Q86UT8 332 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 DNAJC7Q99615 494 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 SALL4Q9UJQ4 1053 aa14.67□□□□□ -0.06
TNFRSF21-201ENST00000296861 PDS5AQ29RF7 1337 aaKnown RBP14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 LAMA4Q16363 1823 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L15C9J2P7 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L13C9JLJ4 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L11C9JVI0 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L18D6R9N7 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L22D6RA61 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L17D6RBQ6 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L19D6RCP7 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 USP17L20D6RJB6 530 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 RHOBTB3O94955 611 aa14.66□□□□□ -0.06
TNFRSF21-201ENST00000296861 CORO7P57737 925 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms