RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SLC39A5Q6ZMH5 540 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 C7orf61Q8IZ16 206 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 ZNF713Q8N859 430 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 SPDYE3A6NKU9 549 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 ZEB2O60315 1214 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 ASGR1P07306 291 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 SCG2P13521 617 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
HMGB2-201ENST00000296503 UBE2SQ16763 222 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 IL17RAQ96F46 866 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
HMGB2-201ENST00000296503 NID2Q14112 1375 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 A0A1W2PQ45 241 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-201ENST00000296503 A0A1W2PQY0 241 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 STXBP3O00186 592 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 CST5P28325 142 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-201ENST00000296503 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-201ENST00000296503 TYW1BQ6NUM6 668 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 IL31RAQ8NI17 732 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 COPS5Q92905 334 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 RNF26Q9BY78 433 aaPredicted RBP13.86□□□□□ -0.19
HMGB2-201ENST00000296503 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
HMGB2-201ENST00000296503 RIC8AQ9NPQ8 531 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 STARD7Q9NQZ5 370 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 RTEL1Q9NZ71 1219 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 MRVI1Q9Y6F6 885 aa13.86□□□□□ -0.19
HMGB2-201ENST00000296503 H0YGN5 161 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 ARIH2O95376 493 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 ADCY7P51828 1080 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 PKN1Q16512 942 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 BRDTQ58F21 947 aaPredicted RBP13.85□□□□□ -0.19
HMGB2-201ENST00000296503 PRPF38BQ5VTL8 546 aaKnown RBP13.85□□□□□ -0.19
HMGB2-201ENST00000296503 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
HMGB2-201ENST00000296503 GLT8D2Q9H1C3 349 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 PCDHA6Q9UN73 950 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 PCDHA8Q9Y5H6 950 aa13.85□□□□□ -0.19
HMGB2-201ENST00000296503 CTAGE5O15320 804 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 CPT1AP50416 773 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 RTP1P59025 263 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 NKX3-2P78367 333 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 CCDC62Q6P9F0 684 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 EHMT1Q9H9B1 1298 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 C6orf50Q9HD87 102 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
HMGB2-201ENST00000296503 PFKFB2O60825 505 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 GH1P01241 217 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 MYL3P08590 195 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 SCRN1Q12765 414 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
HMGB2-201ENST00000296503 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 STAM2O75886 525 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 CDKL5O76039 1030 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 RGS20O76081 388 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
HMGB2-201ENST00000296503 MRPS9P82933 396 aaKnown RBP13.83□□□□□ -0.2
HMGB2-201ENST00000296503 PCNX4Q63HM2 1172 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 DHX37Q8IY37 1157 aaKnown RBP13.83□□□□□ -0.2
HMGB2-201ENST00000296503 POLR3EQ9NVU0 708 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 ZMYND8Q9ULU4 1186 aaPredicted RBP13.83□□□□□ -0.2
HMGB2-201ENST00000296503 ELP1O95163 1332 aa13.83□□□□□ -0.2
HMGB2-201ENST00000296503 SORBS3O60504 671 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 CABYRO75952 493 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 DEXIO95424 95 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 TGFB3P10600 412 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 SYN1P17600 705 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 GNA11P29992 359 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 NLRX1Q86UT6 975 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 TMEM260Q9NX78 707 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 FRMPD4Q14CM0 1322 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 NLRP5P59047 1200 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 TLE2Q04725 743 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 ME3Q16798 604 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 TEX2Q8IWB9 1127 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 CCDC148Q8NFR7 591 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 AFG1LQ8WV93 481 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 PRKAG2Q9UGJ0 569 aa13.82□□□□□ -0.2
HMGB2-201ENST00000296503 KIAA1217Q5T5P2 1943 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms