RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 SLC1A4P43007 532 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 PABPC4Q13310 644 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■□□□□ 10.2
CAPN2-201ENST00000295006 CLEC4GQ6UXB4 293 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 MED4Q9NPJ6 270 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 HYOU1Q9Y4L1 999 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 KCNK3O14649 394 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 RASA1P20936 1047 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 LLGL1Q15334 1064 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 DUSP9Q99956 384 aaKnown RBP17.05■□□□□ 0.32
CAPN2-201ENST00000295006 NFU1Q9UMS0 254 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 EPHB6O15197 1021 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 MAN2A1Q16706 1144 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 SH2D3CQ8N5H7 860 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
CAPN2-201ENST00000295006 JRKLQ9Y4A0 524 aa17.05■□□□□ 0.32
CAPN2-201ENST00000295006 SFI1A8K8P3 1242 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 MYBL2P10244 700 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 PRR16Q569H4 304 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 ZNF622Q969S3 477 aaKnown RBP eCLIP17.04■□□□□ 0.327e-8■□□□□ 10.2
CAPN2-201ENST00000295006 NUDT12Q9BQG2 462 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 MXD3Q9BW11 206 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 ZC3H12CQ9C0D7 883 aaKnown RBP17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 SLC37A4O43826 429 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 STAT3P40763 770 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
CAPN2-201ENST00000295006 ADAM9Q13443 819 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CCDC65Q8IXS2 484 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 MSANTD4Q8NCY6 345 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CCDC43Q96MW1 224 aaKnown RBP17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CFAP221Q4G0U5 840 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
CAPN2-201ENST00000295006 EHD4Q9H223 541 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 SEMA6BQ9H3T3 888 aa17.04■□□□□ 0.32
CAPN2-201ENST00000295006 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
CAPN2-201ENST00000295006 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 SPATA4Q8NEY3 305 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 OSBPL9Q96SU4 736 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 A0A1W2PQC6 194 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 TMEM110-MUSTN1A8MSY1 372 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 CLIC2O15247 247 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 OPA1O60313 960 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 HEXIM1O94992 359 aaKnown RBP17.03■□□□□ 0.32
CAPN2-201ENST00000295006 ABCB4P21439 1286 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 TTC31Q49AM3 519 aaPredicted RBP17.03■□□□□ 0.32
CAPN2-201ENST00000295006 AK8Q96MA6 479 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
CAPN2-201ENST00000295006 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 KBTBD4Q9NVX7 518 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 PDS5AQ29RF7 1337 aaKnown RBP17.03■□□□□ 0.32
CAPN2-201ENST00000295006 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 PDCLQ13371 301 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 KCNB1Q14721 858 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
CAPN2-201ENST00000295006 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
CAPN2-201ENST00000295006 TLDC2A0PJX2 215 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
CAPN2-201ENST00000295006 MAP2K7O14733 419 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 PALMO75781 387 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 ASIC2Q16515 512 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 SLF2Q8IX21 1173 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 UBLCP1Q8WVY7 318 aaPredicted RBP17.02■□□□□ 0.32
CAPN2-201ENST00000295006 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
CAPN2-201ENST00000295006 CAPS2Q9BXY5 557 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 FEZ2Q9UHY8 353 aaPredicted RBP17.02■□□□□ 0.32
CAPN2-201ENST00000295006 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 ZSCAN5CA6NGD5 496 aaPredicted RBP17.02■□□□□ 0.32
CAPN2-201ENST00000295006 POTECB2RU33 542 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 CETN3O15182 167 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 AKR1B1P15121 316 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 UBXN2AP68543 259 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 IFFO1Q0D2I5 559 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 KIAA0895Q8NCT3 520 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 AP1M1Q9BXS5 423 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 SH3GLB2Q9NR46 395 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 ARHGAP20Q9P2F6 1191 aa17.02■□□□□ 0.32
CAPN2-201ENST00000295006 PSMD14O00487 310 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 KLRC4O43908 158 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 HLA-DOAP06340 250 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 TCP1P17987 556 aaKnown RBP17.02■□□□□ 0.31
CAPN2-201ENST00000295006 ZYXQ15942 572 aaKnown RBP17.02■□□□□ 0.31
CAPN2-201ENST00000295006 GALNT17Q6IS24 598 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 TAX1BP1Q86VP1 789 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 SPICE1Q8N0Z3 855 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 RETREG2Q8NC44 543 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.31
CAPN2-201ENST00000295006 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
CAPN2-201ENST00000295006 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
CAPN2-201ENST00000295006 TBCAO75347 108 aaKnown RBP17.01■□□□□ 0.31
CAPN2-201ENST00000295006 PLCG2P16885 1265 aa17.01■□□□□ 0.31
CAPN2-201ENST00000295006 DNAJC7Q99615 494 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms