RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 TRIOO75962 3097 aa10.31□□□□□ -0.76
TFF1-201ENST00000291527 MICAL3Q7RTP6 2002 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 CYTH3O43739 400 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 NBNO60934 754 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 ZNF286BP0CG31 522 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 DEFB103AP81534 67 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 MBTPS1Q14703 1052 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 TRIM71Q2Q1W2 868 aaKnown RBP10.3□□□□□ -0.76
TFF1-201ENST00000291527 GPATCH4Q5T3I0 446 aaKnown RBP10.3□□□□□ -0.76
TFF1-201ENST00000291527 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 SKAP1Q86WV1 359 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 FBXO11Q86XK2 927 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 MTMR8Q96EF0 704 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 RMDN3Q96TC7 470 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 GAS2L1Q99501 681 aaPredicted RBP10.3□□□□□ -0.76
TFF1-201ENST00000291527 ALG1Q9BT22 464 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 DSCC1Q9BVC3 393 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 KAT14Q9H8E8 782 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 DDX41Q9UJV9 622 aaKnown RBP10.3□□□□□ -0.76
TFF1-201ENST00000291527 ABCB11O95342 1321 aa10.3□□□□□ -0.76
TFF1-201ENST00000291527 ATG2AQ2TAZ0 1938 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 CFBP00751 764 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 NR3C2P08235 984 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 CYP21A2P08686 494 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 KCNQ1P51787 676 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 ANTXR2P58335 489 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 TAP1Q03518 808 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 RAB30Q15771 203 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 PTGISQ16647 500 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 NFRKBQ6P4R8 1299 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 RPUSD2Q8IZ73 545 aaKnown RBP10.29□□□□□ -0.76
TFF1-201ENST00000291527 PIBF1Q8WXW3 757 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 ASB2Q96Q27 587 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
TFF1-201ENST00000291527 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
TFF1-201ENST00000291527 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 MTCH2Q9Y6C9 303 aa10.29□□□□□ -0.76
TFF1-201ENST00000291527 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 KLRF2D3W0D1 207 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 NKRFO15226 690 aaKnown RBP eCLIP10.28□□□□□ -0.76
TFF1-201ENST00000291527 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 LPXNO60711 386 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 GH1P01241 217 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 MYCLP12524 364 aaPredicted RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 PSEN2P49810 448 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 HSD17B4P51659 736 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 SEMA3FQ13275 785 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 HSDL1Q3SXM5 330 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 ARHGEF16Q5VV41 709 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 IQCA1Q86XH1 822 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
TFF1-201ENST00000291527 ARNTL2Q8WYA1 636 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 PIGSQ96S52 555 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 PDCD2LQ9BRP1 358 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 LOXHD1Q8IVV2 1947 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 SIP14410 1827 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
TFF1-201ENST00000291527 HAS3O00219 553 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 SUPT20HL2P0C7V6 817 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 CKBP12277 381 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 BMP1P13497 986 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 CHMLP26374 656 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
TFF1-201ENST00000291527 STXBP2Q15833 593 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 IMMTQ16891 758 aaKnown RBP10.27□□□□□ -0.77
TFF1-201ENST00000291527 TMEM67Q5HYA8 995 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 IFIT1BQ5T764 474 aaKnown RBP10.27□□□□□ -0.77
TFF1-201ENST00000291527 ZNF618Q5T7W0 954 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 FAM117BQ6P1L5 589 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.27□□□□□ -0.77
TFF1-201ENST00000291527 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 HOMER1Q86YM7 354 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
TFF1-201ENST00000291527 MYL10Q9BUA6 226 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 THEGQ9P2T0 379 aa10.27□□□□□ -0.77
TFF1-201ENST00000291527 MRPL11Q9Y3B7 192 aaKnown RBP10.27□□□□□ -0.77
TFF1-201ENST00000291527 TNFRSF10AO00220 468 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 EIF3JO75822 258 aaKnown RBP10.26□□□□□ -0.77
TFF1-201ENST00000291527 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
TFF1-201ENST00000291527 MRPS9P82933 396 aaKnown RBP10.26□□□□□ -0.77
TFF1-201ENST00000291527 GHRHRQ02643 423 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 GRB10Q13322 594 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 MFSD10Q14728 455 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 GRM4Q14833 912 aa10.26□□□□□ -0.77
TFF1-201ENST00000291527 PGM5Q15124 567 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms