RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PDLIM2Q96JY6 352 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 MLXIPQ9HAP2 919 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 LMNB1P20700 586 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 ATP2A3Q93084 1043 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 NEDD4P46934 1319 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 LTKP29376 864 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 POLE2P56282 527 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 MAGED2Q9UNF1 606 aaPredicted RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 AATKQ6ZMQ8 1374 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 EIF4E1BA6NMX2 242 aaKnown RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 NCK2O43639 380 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 RBBP5Q15291 538 aaKnown RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 TAF11Q15544 211 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 CDAN1Q8IWY9 1227 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 ZNF653Q96CK0 615 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 ZBED4O75132 1171 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 DYNLT1P63172 113 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 ARHGEF16Q5VV41 709 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 ABHD10Q9NUJ1 306 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
SHROOM4-201ENST00000289292 TMOD1P28289 359 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 ODR4Q5SWX8 454 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 GALNT17Q6IS24 598 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 KLHL29Q96CT2 875 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 SYNJ2BP-COX16A0A087WUM0 186 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 ZNF449Q6P9G9 518 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 COX16Q9P0S2 106 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 FOXN1O15353 648 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 ALAS1P13196 640 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 GUCY2CP25092 1073 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 ICE2Q659A1 982 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 HIBCHQ6NVY1 386 aaPredicted RBP16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 PPP2R5EQ16537 467 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 METTL13Q8N6R0 699 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 TCP10L2B9ZVM9 353 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 SPICE1Q8N0Z3 855 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 ASAP1Q9ULH1 1129 aa16.68■□□□□ 0.26
SHROOM4-201ENST00000289292 PALMO75781 387 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 SERPING1P05155 500 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 ZBED6P86452 979 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 NLRX1Q86UT6 975 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 RFX6Q8HWS3 928 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 TBC1D10CQ8IV04 446 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 ABTB1Q969K4 478 aaPredicted RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 MMS19Q96T76 1030 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 SNAP25P60880 206 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 ANAPC5Q9UJX4 755 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 FAF1Q9UNN5 650 aaPredicted RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 MAPK4P31152 587 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 GFPT1Q06210 699 aaPredicted RBP16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 ALS2CLQ60I27 953 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 PCDHA1Q9Y5I3 950 aa16.67■□□□□ 0.26
SHROOM4-201ENST00000289292 USP17L3A6NCW0 530 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 USP17L4A6NCW7 530 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 TEX33O43247 280 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 NSFP46459 744 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 USP17L1Q7RTZ2 530 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 UBE2TQ9NPD8 197 aaPredicted RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 PCDHB4Q9Y5E5 795 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 SETSIPP0DME0 302 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 FAM186BQ8IYM0 893 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 ELAC2Q9BQ52 826 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 H7C0C1 242 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 N4BP1O75113 896 aaKnown RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 ECEL1O95672 775 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 ATP5OP48047 213 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 DR1Q01658 176 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 AFG3L2Q9Y4W6 797 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 ATP7BP35670 1465 aa16.66■□□□□ 0.26
SHROOM4-201ENST00000289292 DKC1O60832 514 aaKnown RBP eCLIP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms