RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 UBAP1LF5GYI3 381 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 GFPT1Q06210 699 aaPredicted RBP14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 CALCRLQ16602 461 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 HAUS3Q68CZ6 603 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 CCDC155Q8N6L0 562 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 GLIS3Q8NEA6 775 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 LARP4BQ92615 738 aaKnown RBP14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 SLC1A4P43007 532 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 RASSF7Q02833 373 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 LRRC41Q15345 812 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 GUF1Q8N442 669 aaKnown RBP14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 TSEN2Q8NCE0 465 aaKnown RBP14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 WDR66Q8TBY9 1149 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 RUBCNQ92622 972 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 MTMR8Q96EF0 704 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 NYXQ9GZU5 481 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 STIM2Q9P246 746 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 STK17AQ9UEE5 414 aa14.67□□□□□ -0.06
SLC28A1-201ENST00000286749 PVALEFA0A1B0GWK0 134 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 POTEMA6NI47 508 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 BUB1O43683 1085 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 SLC37A4O43826 429 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 FGFR1OPO95684 399 aaKnown RBP14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 CDK8P49336 464 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 IRAK1P51617 712 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 DNAJC21Q5F1R6 531 aaKnown RBP14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 LRRC55Q6ZSA7 311 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 CACNA2D4Q7Z3S7 1137 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 MTMR9Q96QG7 549 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 TLR10Q9BXR5 811 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 TANGO6Q9C0B7 1094 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 UBA5Q9GZZ9 404 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 EHD4Q9H223 541 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 PJA2O43164 708 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 PAFAH1B1P43034 410 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 EPHB4P54760 987 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 GSTO1P78417 241 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 RBM12Q9NTZ6 932 aaKnown RBP14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 ANKIB1Q9P2G1 1089 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 COL24A1Q17RW2 1714 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 ABCB11O95342 1321 aa14.66□□□□□ -0.06
SLC28A1-201ENST00000286749 NRAPQ86VF7 1730 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TDP2O95551 362 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 NAP1L1P55209 391 aaKnown RBP14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 LRRC63Q05C16 580 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 PPFIA1Q13136 1202 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TDRD12Q587J7 1177 aaKnown RBP14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 KLHDC7AQ5VTJ3 777 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 C8orf74Q6P047 294 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TMC4Q7Z404 712 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 MS4A14Q96JA4 679 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 NUDT12Q9BQG2 462 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 RABEP2Q9H5N1 569 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 THRAP3Q9Y2W1 955 aaKnown RBP14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 GOLGA8KD6RF30 607 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TOM1O60784 492 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TM4SF1P30408 202 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 PPP4CP60510 307 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 ASTE1Q2TB18 679 aaPredicted RBP14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 KCNK18Q7Z418 384 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 RAD54LQ92698 747 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 DDX12PQ92771 950 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 GPR101Q96P66 508 aaPredicted RBP14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 SH3GL2Q99962 352 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 CAPS2Q9BXY5 557 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 NLRC4Q9NPP4 1024 aa14.65□□□□□ -0.06
SLC28A1-201ENST00000286749 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 CCT5P48643 541 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 ORC2Q13416 577 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 TTC31Q49AM3 519 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 EMBQ6PCB8 327 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 NEDD1Q8NHV4 660 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 SNX29Q8TEQ0 813 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 NOX5Q96PH1 765 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 ZNF287Q9HBT7 754 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 TNRC6CQ9HCJ0 1690 aaKnown RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 OPA1O60313 960 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 KCNMA1Q12791 1236 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 TTC19Q6DKK2 380 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 C16orf86Q6ZW13 317 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 PPM1EQ8WY54 764 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 ARL8AQ96BM9 186 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 TSG101Q99816 390 aa14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 RTFDC1Q9BY42 306 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 FRMPD2Q68DX3 1309 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-201ENST00000286749 BTDP43251 543 aa14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 NOP2P46087 812 aaKnown RBP14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 DNA2P51530 1060 aa14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 GNGT1P63211 74 aa14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 TTMPQ5BVD1 217 aa14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 COA7Q96BR5 231 aa14.63□□□□□ -0.07
SLC28A1-201ENST00000286749 RUFY1Q96T51 708 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms