RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LIMA1Q9UHB6 759 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 SLC37A4O43826 429 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 NDUFB10O96000 172 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 OR52Z1P0C646 297 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 TECP42680 631 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 FXR1P51114 621 aaKnown RBP eCLIP20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 NBPF9Q3BBW0 867 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
PDLIM3-201ENST00000284767 LRRC10BA6NIK2 292 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 IVLP07476 585 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 CYP26C1Q6V0L0 522 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 LEKR1Q6ZMV7 388 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 GJA10Q969M2 543 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 MTMR8Q96EF0 704 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 DISC1Q9NRI5 854 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L15C9J2P7 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L13C9JLJ4 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L11C9JVI0 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L18D6R9N7 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L22D6RA61 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L17D6RBQ6 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L19D6RCP7 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L20D6RJB6 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 STAT6P42226 847 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 SPAG1Q07617 926 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L24Q0WX57 530 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 USP17L6PQ6QN14 398 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 ABHD10Q9NUJ1 306 aa20.43■□□□□ 0.86
PDLIM3-201ENST00000284767 hCG_1984214I3L0E3 225 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 EGFRP00533 1210 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 UBA7P41226 1012 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 TXKP42681 527 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 CDC37Q16543 378 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 SPDYE2Q495Y8 402 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 ZNF713Q8N859 430 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 ACRBPQ8NEB7 543 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 ACER1Q8TDN7 264 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 RPS6KA5O75582 802 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 IKQ13123 557 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 KIAA1755Q5JYT7 1200 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 ACBD3Q9H3P7 528 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 RIC8AQ9NPQ8 531 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 KIF13BQ9NQT8 1826 aa20.42■□□□□ 0.86
PDLIM3-201ENST00000284767 ARHGAP25P42331 645 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 ERVK-24P63145 666 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 R3HDM1Q15032 1099 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 FAM71BQ8TC56 605 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 PCDHA1Q9Y5I3 950 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 VSNL1P62760 191 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 CASP8Q14790 479 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 KRT31Q15323 416 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 FAM151AQ8WW52 585 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 RASSF4Q9H2L5 321 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 CTNND2Q9UQB3 1225 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 NFKBIEO00221 500 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 N4BP3O15049 544 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 RHOXF2BP0C7M4 288 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 USH1GQ495M9 461 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 WDR93Q6P2C0 686 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 ANKRD20A12PQ8NF67 263 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 RHOXF2Q9BQY4 288 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 PYM1Q9BRP8 204 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 RWDD2AQ9UIY3 292 aa20.41■□□□□ 0.86
PDLIM3-201ENST00000284767 MYO1CO00159 1063 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 WNT10BO00744 389 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 PRPHP41219 470 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 CLK2P49760 499 aaKnown RBP20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 TGFB2P61812 414 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 AMPD2Q01433 879 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 HSP90B2PQ58FF3 399 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 CUL5Q93034 780 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 MAPK8IP1Q9UQF2 711 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 ZYXQ15942 572 aaKnown RBP20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 SRLQ86TD4 932 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 MED4Q9NPJ6 270 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 MYO6Q9UM54 1294 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
PDLIM3-201ENST00000284767 LAD1O00515 517 aa20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 PLCG1P19174 1290 aa20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 POLD1P28340 1107 aa20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 CCT6AP40227 531 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 CABP7Q86V35 215 aa20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 HERC5Q9UII4 1024 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 GTPBP6O43824 516 aaPredicted RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 COPB1P53618 953 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 P2RX7Q99572 595 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 MMTAG2Q9BU76 263 aaKnown RBP20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 FAN1Q9Y2M0 1017 aa20.39■□□□□ 0.85
PDLIM3-201ENST00000284767 POTEMA6NI47 508 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 CALCRLQ16602 461 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
PDLIM3-201ENST00000284767 AGBL3Q8NEM8 1001 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms