RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PPP1R9AQ9ULJ8 1098 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 E9PMD0 336 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 VWA5AO00534 786 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 MSH4O15457 936 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 ICAM1P05362 532 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 PRPHP41219 470 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 CLEC4DQ8WXI8 215 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 CDK5RAP3Q96JB5 506 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
GGPS1-201ENST00000282841 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 LAD1O00515 517 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 ZBTB39O15060 712 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 TMEM266Q2M3C6 531 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 LPAR1Q92633 364 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-201ENST00000282841 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
GGPS1-201ENST00000282841 ARP10275 920 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 PTGS1P23219 599 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 SREBF1P36956 1147 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
GGPS1-201ENST00000282841 PSMC6P62333 389 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 CCDC144BQ3MJ40 725 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
GGPS1-201ENST00000282841 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 TAAR1Q96RJ0 339 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 BLOC1S4Q9NUP1 217 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 RGL1Q9NZL6 768 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
GGPS1-201ENST00000282841 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
GGPS1-201ENST00000282841 FCER1AP12319 257 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 MMP14P50281 582 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 LRMPQ12912 555 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 CCSER1Q9C0I3 900 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 EML1O00423 815 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 MED24O75448 989 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 IDEP14735 1019 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 ERCC3P19447 782 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 ASIC1P78348 528 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 CALML4Q96GE6 196 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 WDR11Q9BZH6 1224 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 TAF1DQ9H5J8 278 aaPredicted RBP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 TBC1D7Q9P0N9 293 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 SYNPO2Q9UMS6 1093 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 CSADQ9Y600 493 aa12.33□□□□□ -0.44
GGPS1-201ENST00000282841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
GGPS1-201ENST00000282841 ESPNB1AK53 854 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
GGPS1-201ENST00000282841 USP11P51784 963 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 MYMKA6NI61 221 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
GGPS1-201ENST00000282841 CLCN1P35523 988 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 USP14P54578 494 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 MYL5Q02045 173 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
GGPS1-201ENST00000282841 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 ZBED4O75132 1171 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PRCPP42785 496 aa12.32□□□□□ -0.44
GGPS1-201ENST00000282841 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
GGPS1-201ENST00000282841 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms