RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ZEB2O60315 1214 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 EVI5O60447 810 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 EIF3JO75822 258 aaKnown RBP7.48□□□□□ -1.21
CD44-204ENST00000279452 MYL3P08590 195 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 CAPN2P17655 700 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 EDNRBP24530 442 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 GNA11P29992 359 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 ZNF76P36508 570 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 IRX5P78411 483 aaPredicted RBP7.48□□□□□ -1.21
CD44-204ENST00000279452 BEX3Q00994 111 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 SP4Q02446 784 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 TRIM29Q14134 588 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 LRRC41Q15345 812 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 PKN1Q16512 942 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 LY6KQ17RY6 165 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 BRDTQ58F21 947 aaPredicted RBP7.48□□□□□ -1.21
CD44-204ENST00000279452 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 TMEM63BQ5T3F8 832 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 IQSEC1Q6DN90 963 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 TAPT1Q6NXT6 567 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 NLRX1Q86UT6 975 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 C7orf61Q8IZ16 206 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 REXO1Q8N1G1 1221 aaKnown RBP7.48□□□□□ -1.21
CD44-204ENST00000279452 BICD2Q8TD16 824 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 MORC4Q8TE76 937 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 WASF1Q92558 559 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 IL17RAQ96F46 866 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 AIFM3Q96NN9 605 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 ALG1Q9BT22 464 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 ANO3Q9BYT9 981 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 KATNBL1Q9H079 304 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 GLT8D2Q9H1C3 349 aa7.48□□□□□ -1.21
CD44-204ENST00000279452 ORC3Q9UBD5 711 aaPredicted RBP7.48□□□□□ -1.21
CD44-204ENST00000279452 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
CD44-204ENST00000279452 JAK2O60674 1132 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 ADAMTS4O75173 837 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 ARIH2O95376 493 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 FOSP01100 380 aaPredicted RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 GH1P01241 217 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 CPT1AP50416 773 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 GHRHRQ02643 423 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 KCNA10Q16322 511 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 DUSP28Q4G0W2 176 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 FAM184AQ8NB25 1140 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 PCSK9Q8NBP7 692 aaKnown RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 RASGRP4Q8TDF6 673 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 COPS5Q92905 334 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 ZSCAN31Q96LW9 406 aaPredicted RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 GLT1D1Q96MS3 346 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 KIF2CQ99661 725 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 MLXIPQ9HAP2 919 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 STARD7Q9NQZ5 370 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 SH2B1Q9NRF2 756 aaPredicted RBP7.47□□□□□ -1.21
CD44-204ENST00000279452 KCNJ14Q9UNX9 436 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 ATP11BQ9Y2G3 1177 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 STK36Q9NRP7 1315 aa7.47□□□□□ -1.21
CD44-204ENST00000279452 DOCK3Q8IZD9 2030 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 A0A1W2PQ45 241 aaPredicted RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 A0A1W2PQY0 241 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 ESYT2A0FGR8 921 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 NOP56O00567 594 aaKnown RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 FIBPO43427 364 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 STAM2O75886 525 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 CTDNEP1O95476 244 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 GGPS1O95749 300 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 ASGR1P07306 291 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 RGS19P49795 217 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 ACLYP53396 1101 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 GJA9P57773 515 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 MTMR1Q13613 665 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 GNL2Q13823 731 aaKnown RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 FAM47CQ5HY64 1035 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 KCNV1Q6PIU1 500 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 CXCL17Q6UXB2 119 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 NSUN7Q8NE18 718 aaKnown RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 ZMYND12Q9H0C1 365 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 PRDM5Q9NQX1 630 aaPredicted RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 SH3GLB2Q9NR46 395 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 PHF24Q9UPV7 400 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
CD44-204ENST00000279452 LCTP09848 1927 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 MYH6P13533 1939 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
CD44-204ENST00000279452 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 RBM47A0AV96 593 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 DDX39AO00148 427 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 PQBP1O60828 265 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 UBA1P22314 1058 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 KRT2P35908 639 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 MNX1P50219 401 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms