RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 TIGD1Q96MW7 591 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 KCNMB3Q9NPA1 279 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 ASTN1O14525 1302 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 ZBTB39O15060 712 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 MARCH6O60337 910 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 HSD17B4P51659 736 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 MRPS9P82933 396 aaKnown RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 SPIRE1Q08AE8 756 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 STX1AQ16623 288 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 Q3C1V9 767 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 TRMT1LQ7Z2T5 733 aaKnown RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
SSRP1-201ENST00000278412 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.29
SSRP1-201ENST00000278412 POTEB3A0JP26 581 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 ZBED4O75132 1171 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 ZNF76P36508 570 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 PRPHP41219 470 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 CNTN2Q02246 1040 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 POTEBQ6S5H4 581 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 FAM177A1Q8N128 213 aaPredicted RBP13.21□□□□□ -0.3
SSRP1-201ENST00000278412 GINM1Q9NU53 330 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 PCDHA12Q9UN75 941 aa13.21□□□□□ -0.3
SSRP1-201ENST00000278412 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 CTAGE5O15320 804 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 PSMC6P62333 389 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 LCTP09848 1927 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 MED24O75448 989 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 PTGS1P23219 599 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 PPATQ06203 517 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 MCM6Q14566 821 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 MBOAT7Q96N66 472 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 NAP1L5Q96NT1 182 aaPredicted RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
SSRP1-201ENST00000278412 MORC2Q9Y6X9 1032 aaPredicted RBP13.2□□□□□ -0.3
SSRP1-201ENST00000278412 CYP3A7-CYP3A51PA0A087WV96 503 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 CYP3A7P24462 503 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 CLCN1P35523 988 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 SARSP49591 514 aaKnown RBP13.19□□□□□ -0.3
SSRP1-201ENST00000278412 USP11P51784 963 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 EEF2KMTQ96G04 330 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 E9PMD0 336 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 CNMDO75829 334 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.39e-7■■■□□ 16
SSRP1-201ENST00000278412 STX17P56962 302 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 KLHL10Q6JEL2 608 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 PLA2G4DQ86XP0 818 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 HSD3B7Q9H2F3 369 aa13.19□□□□□ -0.3
SSRP1-201ENST00000278412 ATP9AO75110 1047 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 NLRP12P59046 1061 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 CCSER1Q9C0I3 900 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 WRAP73Q9P2S5 460 aaPredicted RBP13.18□□□□□ -0.3
SSRP1-201ENST00000278412 VAV3Q9UKW4 847 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 LAD1O00515 517 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 SMARCE1Q969G3 411 aa13.18□□□□□ -0.3
SSRP1-201ENST00000278412 ADCY5O95622 1261 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 PGK2P07205 417 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 HERVK_113P62684 666 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 NCAPHQ15003 741 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 RBM46Q8TBY0 533 aaKnown RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
SSRP1-201ENST00000278412 ANO10Q9NW15 660 aa13.17□□□□□ -0.3
SSRP1-201ENST00000278412 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms