RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 TMEM87BQ96K49 555 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 FAM167BQ9BTA0 163 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 AGO4Q9HCK5 861 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 IL1RAPL2Q9NP60 686 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 LATS2Q9NRM7 1088 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 TMPRSS4Q9NRS4 437 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 CWC25Q9NXE8 425 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 ZNF180Q9UJW8 692 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 HCN2Q9UL51 889 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 TMX2Q9Y320 296 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 PCDHB3Q9Y5E6 796 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 ITIH6Q6UXX5 1313 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 EP400Q96L91 3159 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 COL2A1P02458 1487 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 A6NCN8 305 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 CPLX1O14810 134 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 SUSD5O60279 629 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 ZEB2O60315 1214 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 RHCEP18577 417 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 CAP2P40123 477 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 RHDQ02161 417 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 NEK10Q6ZWH5 1172 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 GET4Q7L5D6 327 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 SMAP1Q8IYB5 467 aaPredicted RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 RASSF8Q8NHQ8 419 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 SELENOOQ9BVL4 669 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 LRRCC1Q9C099 1032 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 RIC8AQ9NPQ8 531 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.36□□□□□ -1.87
HERC4-201ENST00000277817 SERTAD1Q9UHV2 236 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 EXOC6BQ9Y2D4 811 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 PCDHB5Q9Y5E4 795 aa3.36□□□□□ -1.87
HERC4-201ENST00000277817 NEMP1O14524 444 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MAN2A2P49641 1150 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CCT4P50991 539 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 RENBPP51606 427 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 GEMIN4P57678 1058 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 MPP1Q00013 466 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 DSG1Q02413 1049 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CLN3Q13286 438 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ODF1Q14990 250 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SAFBQ15424 915 aaKnown RBP eCLIP3.35□□□□□ -1.87
HERC4-201ENST00000277817 MINDY4Q4G0A6 757 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 PKDCCQ504Y2 493 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MMS22LQ6ZRQ5 1243 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CNTROBQ8N137 903 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 LSMEM1Q8N8F7 131 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MRGPRX3Q96LB0 322 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 TESK2Q96S53 571 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SPSB2Q99619 263 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 FSD1Q9BTV5 496 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SIL1Q9H173 461 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ELP3Q9H9T3 547 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZNF214Q9UL59 606 aaPredicted RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 GOLGA6CA6NDK9 693 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 GOLGA6BA6NDN3 693 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SRGAP3O43295 1099 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 GOLGA6DP0CG33 693 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 RXRBP28702 533 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 FAM160A1Q05DH4 1040 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZYXQ15942 572 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 PLEKHO1Q53GL0 409 aaPredicted RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 TPH2Q8IWU9 490 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 PRR18Q8N4B5 295 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZNF280CQ8ND82 737 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 FUBP3Q96I24 572 aaKnown RBP eCLIP3.35□□□□□ -1.87
HERC4-201ENST00000277817 SUSD3Q96L08 255 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.35□□□□□ -1.873e-7■■■□□ 18.5
HERC4-201ENST00000277817 BRMS1Q9HCU9 246 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 NLRC4Q9NPP4 1024 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 GOLGA6AQ9NYA3 693 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZDHHC3Q9NYG2 299 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 A0A1W2PRQ8 180 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 F6X3S4 739 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CHL1O00533 1208 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 HIP1RO75146 1068 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CCDC85BQ15834 202 aaPredicted RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 RPAP2Q8IXW5 612 aaPredicted RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 KIAA0319LQ8IZA0 1049 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 TTC9Q92623 222 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SLC10A4Q96EP9 437 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 CCDC34Q96HJ3 373 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 SEC31BQ9NQW1 1179 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 TMEM98Q9Y2Y6 226 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 R3HCC1Q9Y3T6 440 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 GJA3Q9Y6H8 435 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 NPHP3Q7Z494 1330 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 J3KRW8 73 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 PES1O00541 588 aaKnown RBP3.35□□□□□ -1.87
HERC4-201ENST00000277817 FIBPO43427 364 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MTA2O94776 668 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ZBED1O96006 694 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 MYL6BP14649 208 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 ATP4AP20648 1035 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 GUCY2CP25092 1073 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 PSMA3P25788 255 aa3.35□□□□□ -1.87
HERC4-201ENST00000277817 TBX2Q13207 712 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms