RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CEP85LQ5SZL2 805 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 MMTAG2Q9BU76 263 aaKnown RBP20.63■□□□□ 0.89
SSC4D-201ENST00000275560 DLEC1Q9Y238 1755 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 LCA5LO95447 670 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 SPRED3Q2MJR0 410 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 HGSNATQ68CP4 663 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 NLRP14Q86W24 1093 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 MYCBPAPQ8TBZ2 947 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 PACSIN1Q9BY11 444 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 PLAAQ9Y263 795 aa20.63■□□□□ 0.89
SSC4D-201ENST00000275560 KIF5BP33176 963 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 GSCP56915 257 aaPredicted RBP20.62■□□□□ 0.89
SSC4D-201ENST00000275560 ASTE1Q2TB18 679 aaPredicted RBP20.62■□□□□ 0.89
SSC4D-201ENST00000275560 DDX42Q86XP3 938 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSC4D-201ENST00000275560 CCDC47Q96A33 483 aaKnown RBP20.62■□□□□ 0.89
SSC4D-201ENST00000275560 ERVV-1B6SEH8 477 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 RAD51CO43502 376 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 ORC4O43929 436 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 KLRC1P26715 233 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 PRDX5P30044 214 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 C7orf25Q9BPX7 421 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 MAD2L2Q9UI95 211 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 A0A1B0GUL6 1792 aa20.62■□□□□ 0.89
SSC4D-201ENST00000275560 MYMKA6NI61 221 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 TLR2O60603 784 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 FSBPO95073 299 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 MYL1P05976 194 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 PAK2Q13177 524 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
SSC4D-201ENST00000275560 CENPPQ6IPU0 288 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 MCM9Q9NXL9 1143 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 ZNF804BA4D1E1 1349 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 STXBP3O00186 592 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 OR52Z1P0C646 297 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 TNFRSF8P28908 595 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 KCNMA1Q12791 1236 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 PDXDC1Q6P996 788 aa20.61■□□□□ 0.89
SSC4D-201ENST00000275560 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
SSC4D-201ENST00000275560 MDH1P40925 334 aaKnown RBP20.6■□□□□ 0.89
SSC4D-201ENST00000275560 TXKP42681 527 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 ATP6V1G3Q96LB4 118 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 NIP7Q9Y221 180 aaKnown RBP eCLIP20.6■□□□□ 0.89
SSC4D-201ENST00000275560 SSBP05455 408 aaKnown RBP eCLIP20.6■□□□□ 0.89
SSC4D-201ENST00000275560 ACTN3Q08043 901 aaPredicted RBP20.6■□□□□ 0.89
SSC4D-201ENST00000275560 HLTFQ14527 1009 aaKnown RBP eCLIP20.6■□□□□ 0.895e-6■□□□□ 9.8
SSC4D-201ENST00000275560 MAN2A1Q16706 1144 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 CNNM4Q6P4Q7 775 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 SLC44A5Q8NCS7 719 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 RUBCNQ92622 972 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 FAM84BQ96KN1 310 aaPredicted RBP20.6■□□□□ 0.89
SSC4D-201ENST00000275560 TFCP2L1Q9NZI6 479 aa20.6■□□□□ 0.89
SSC4D-201ENST00000275560 PJA2O43164 708 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 TMOD1P28289 359 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 ITGB3BPQ13352 177 aaPredicted RBP20.59■□□□□ 0.89
SSC4D-201ENST00000275560 CCDC13Q8IYE1 715 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.59■□□□□ 0.89
SSC4D-201ENST00000275560 BCCIPQ9P287 314 aaKnown RBP eCLIP20.59■□□□□ 0.89
SSC4D-201ENST00000275560 IL6STP40189 918 aaPredicted RBP20.59■□□□□ 0.89
SSC4D-201ENST00000275560 SF3A3Q12874 501 aaKnown RBP eCLIP20.59■□□□□ 0.894e-7■■■□□ 18.1
SSC4D-201ENST00000275560 UIMC1Q96RL1 719 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 FAM170AA1A519 330 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 ATP2C2O75185 946 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 USP8P40818 1118 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 TBC1D5Q92609 795 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 STX8Q9UNK0 236 aa20.59■□□□□ 0.89
SSC4D-201ENST00000275560 ITGB4P16144 1822 aa20.58■□□□□ 0.89
SSC4D-201ENST00000275560 QPCTQ16769 361 aa20.58■□□□□ 0.89
SSC4D-201ENST00000275560 TMED8Q6PL24 325 aaPredicted RBP20.58■□□□□ 0.89
SSC4D-201ENST00000275560 VAT1LQ9HCJ6 419 aa20.58■□□□□ 0.89
SSC4D-201ENST00000275560 POLR2FP61218 127 aaKnown RBP20.58■□□□□ 0.88
SSC4D-201ENST00000275560 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.88
SSC4D-201ENST00000275560 LRRC4CQ9HCJ2 640 aa20.58■□□□□ 0.88
SSC4D-201ENST00000275560 BLOC1S4Q9NUP1 217 aa20.58■□□□□ 0.88
SSC4D-201ENST00000275560 BARHL2Q9NY43 387 aa20.58■□□□□ 0.88
SSC4D-201ENST00000275560 NAPAP54920 295 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 ERVK-9P63128 1117 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 GLE1Q53GS7 698 aaKnown RBP20.57■□□□□ 0.88
SSC4D-201ENST00000275560 NUDT12Q9BQG2 462 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
SSC4D-201ENST00000275560 SH3GLB2Q9NR46 395 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 TBC1D7Q9P0N9 293 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 GRB10Q13322 594 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 CHADLQ6NUI6 762 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 LRRC55Q6ZSA7 311 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 NEUROG2Q9H2A3 272 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 BIN2Q9UBW5 565 aaPredicted RBP20.57■□□□□ 0.88
SSC4D-201ENST00000275560 ADAMTS1Q9UHI8 967 aa20.57■□□□□ 0.88
SSC4D-201ENST00000275560 A0A087X0T9 212 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 NOL4O94818 638 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 NTSR2O95665 410 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 FAM228BP0C875 321 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 SETQ01105 290 aaPredicted RBP20.56■□□□□ 0.88
SSC4D-201ENST00000275560 CCDC40Q4G0X9 1142 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 CCDC84Q86UT8 332 aaPredicted RBP20.56■□□□□ 0.88
SSC4D-201ENST00000275560 CADPS2Q86UW7 1296 aa20.56■□□□□ 0.88
SSC4D-201ENST00000275560 GJA10Q969M2 543 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms