RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
SKP2-202ENST00000274255 PACSIN1Q9BY11 444 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 FAM153BP0C7A2 387 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 NR1D1P20393 614 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 RFC4P35249 363 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 ARHGAP25P42331 645 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 GTF2IP78347 998 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 TROAPQ12815 778 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 FAM153CQ494X1 144 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 FAM26FQ5R3K3 315 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
SKP2-202ENST00000274255 CD248Q9HCU0 757 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
SKP2-202ENST00000274255 FAM153AQ9UHL3 310 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
SKP2-202ENST00000274255 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 GFPT2O94808 682 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 NUP58Q9BVL2 599 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 TBK1Q9UHD2 729 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 PREX1Q8TCU6 1659 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 A0A087WUV0 522 aaPredicted RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 CETN3O15182 167 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 MDM1Q8TC05 714 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 CELF4Q9BZC1 486 aaKnown RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 AMACRQ9UHK6 382 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 TCP1P17987 556 aaKnown RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 EEF1GP26641 437 aaKnown RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 MTM1Q13496 603 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 LRRC14Q15048 493 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 CCDC50Q8IVM0 306 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 ADSSL1Q8N142 457 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
SKP2-202ENST00000274255 MTRQ99707 1265 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 MEGF6O75095 1541 aa12.55□□□□□ -0.4
SKP2-202ENST00000274255 TUBBP07437 444 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 NR2F2P24468 414 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 SNX1Q13596 522 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 MFSD14BQ5SR56 506 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 TPH2Q8IWU9 490 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 FAM84BQ96KN1 310 aaPredicted RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.54□□□□□ -0.4
SKP2-202ENST00000274255 CSF1RP07333 972 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 KCNJ6P48051 423 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 CLNS1AP54105 237 aaKnown RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 ZNF746Q6NUN9 644 aaPredicted RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 GJB7Q6PEY0 223 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 REXO2Q9Y3B8 237 aaKnown RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 CEP83Q9Y592 693 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 BTDP43251 543 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 IL17AQ16552 155 aa12.54□□□□□ -0.4
SKP2-202ENST00000274255 HIBCHQ6NVY1 386 aaPredicted RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
SKP2-202ENST00000274255 ADCY7P51828 1080 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 TUBB2AQ13885 445 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 PFKFB3Q16875 520 aaPredicted RBP12.53□□□□□ -0.4
SKP2-202ENST00000274255 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 PIGOQ8TEQ8 1089 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 RNPC3Q96LT9 517 aaKnown RBP12.53□□□□□ -0.4
SKP2-202ENST00000274255 TUBB2BQ9BVA1 445 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 ZNF287Q9HBT7 754 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 DAPK3O43293 454 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 KIF4AO95239 1232 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 KLRC1P26715 233 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
SKP2-202ENST00000274255 IL6STP40189 918 aaPredicted RBP12.53□□□□□ -0.4
SKP2-202ENST00000274255 EPHB4P54760 987 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 HDLBPQ00341 1268 aaKnown RBP12.53□□□□□ -0.4
SKP2-202ENST00000274255 EFCAB13Q8IY85 973 aa12.53□□□□□ -0.4
SKP2-202ENST00000274255 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms