RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 DDX47Q9H0S4 455 aaKnown RBP14.13□□□□□ -0.15
HERC6-202ENST00000273960 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
HERC6-202ENST00000273960 MAP3K15Q6ZN16 1313 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 LRRC53A6NM62 1247 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 EPB41P11171 864 aaKnown RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 MEX3CQ5U5Q3 659 aaKnown RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 SDR42E1Q8WUS8 393 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 CUL5Q93034 780 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 SAAL1Q96ER3 474 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 LRRC10BA6NIK2 292 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 MRPL12P52815 198 aaKnown RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 AGAP11Q8TF27 550 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 TBC1D22AQ8WUA7 517 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 LPIN2Q92539 896 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 ACTR5Q9H9F9 607 aaPredicted RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 EPB41L4AQ9HCS5 686 aaPredicted RBP14.12□□□□□ -0.15
HERC6-202ENST00000273960 SLC39A2Q9NP94 309 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 PNMA2Q9UL42 364 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 OVOS2A0A0G2JMS6 1433 aa14.12□□□□□ -0.15
HERC6-202ENST00000273960 RTN2O75298 545 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 PDHA1P08559 390 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 KCNJ2P63252 427 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ASIC1P78348 528 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 IL17AQ16552 155 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ANKRD40Q6AI12 368 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 SPAG5Q96R06 1193 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ATP6V0A4Q9HBG4 840 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 HMGB1P1B2RPK0 211 aaPredicted RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 CAND2O75155 1236 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ADD2P35612 726 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 INHBEP58166 350 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 PDE4DQ08499 809 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ADCY1Q08828 1119 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ZKSCAN8Q15776 578 aaPredicted RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 C6orf89Q6UWU4 347 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 BZW1Q7L1Q6 419 aaKnown RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 NOX5Q96PH1 765 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ATP8A1Q9Y2Q0 1164 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 SLIT3O75094 1523 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 CTSWP56202 376 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 IRX1P78414 480 aaPredicted RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 PRPF4BQ13523 1007 aaKnown RBP14.11□□□□□ -0.15
HERC6-202ENST00000273960 CCDC38Q502W7 563 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 ARFGAP2Q8N6H7 521 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 TTLL11Q8NHH1 800 aa14.11□□□□□ -0.15
HERC6-202ENST00000273960 COPB2P35606 906 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 IGHMBP2P38935 993 aaKnown RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 UBA7P41226 1012 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 CASP7P55210 303 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 PSMD2Q13200 908 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 AKNAD1Q5T1N1 836 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 CAVIN3Q969G5 261 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 PACSIN1Q9BY11 444 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 CELF4Q9BZC1 486 aaKnown RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 NEUROG2Q9H2A3 272 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 LOC102724428A0A0B4J2F2 783 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 DAPK3O43293 454 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 CYP19A1P11511 503 aaPredicted RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 SIK1P57059 783 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 DHX9Q08211 1270 aaKnown RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 MAP3K12Q12852 859 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 LRRC14Q15048 493 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 KLHDC7AQ5VTJ3 777 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 FBXL16Q8N461 479 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 ZNF507Q8TCN5 953 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 GPKOWQ92917 476 aaPredicted RBP eCLIP14.1□□□□□ -0.15
HERC6-202ENST00000273960 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 COL5A2P05997 1499 aaPredicted RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 EVI5O60447 810 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 PCCAP05165 728 aaPredicted RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 CDC37Q16543 378 aaPredicted RBP14.1□□□□□ -0.15
HERC6-202ENST00000273960 ADSSL1Q8N142 457 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 TAF4BQ92750 862 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
HERC6-202ENST00000273960 SRCAPQ6ZRS2 3230 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TRAPPC3O43617 180 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TRIM37O94972 964 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 SRGNP10124 158 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 PPP2R2AP63151 447 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 ZNF844Q08AG5 666 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 STK4Q13043 487 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 PDXDC2PQ6P474 469 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TLDC1Q6P9B6 456 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 DYMQ7RTS9 669 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 YTHDF3Q7Z739 585 aaKnown RBP14.09□□□□□ -0.15
HERC6-202ENST00000273960 CCDC50Q8IVM0 306 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 TSGA10Q9BZW7 698 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 BYSLQ13895 437 aaKnown RBP14.09□□□□□ -0.15
HERC6-202ENST00000273960 LLGL1Q15334 1064 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 LRRC41Q15345 812 aa14.09□□□□□ -0.15
HERC6-202ENST00000273960 SUSD4Q5VX71 490 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms