RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MAN2A1Q16706 1144 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ATP10AO60312 1499 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 AFPP02771 609 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 CDR2Q01850 454 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF148Q9UQR1 794 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ITKQ08881 620 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 PABPC4Q13310 644 aaKnown RBP eCLIP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 RFX6Q8HWS3 928 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MAPKAPK5Q8IW41 473 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 PPWD1Q96BP3 646 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MRPL47Q9HD33 250 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MAD1L1Q9Y6D9 718 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 PLEKHG1Q9ULL1 1385 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 FMNL1O95466 1100 aaPredicted RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 RASSF7Q02833 373 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MYO1FO00160 1098 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 FBLN1P23142 703 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 NDUFA8P51970 172 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 POLGP54098 1239 aaPredicted RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TIMM10P62072 90 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.64□□□□□ -1.033e-6■■■■■ 29.3
LIMD1-201ENST00000273317 PEX19P40855 299 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF449Q6P9G9 518 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 UPF3AQ9H1J1 476 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 HEXIM1O94992 359 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TECP42680 631 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 RCN2Q14257 317 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ANKRD36BP1Q96IX9 119 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ACCSQ96QU6 501 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 ANGPTL3Q9Y5C1 460 aa8.64□□□□□ -1.03
LIMD1-201ENST00000273317 TLR3O15455 904 aaKnown RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 RNF26Q9BY78 433 aaPredicted RBP8.64□□□□□ -1.03
LIMD1-201ENST00000273317 H0YIN7 160 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 EEF1DP29692 281 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CAV1Q03135 178 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ZMAT2Q96NC0 199 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 STK32BQ9NY57 414 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PNMA6EA0A0J9YXQ4 647 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PSMC2P35998 433 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 XKR9Q5GH70 373 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 NEK9Q8TD19 979 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 LARP4BQ92615 738 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 DHX38Q92620 1227 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 A0A0D9SFI3 127 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 MAPK4P31152 587 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CASP14P31944 242 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 IQCB1Q15051 598 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PPM1KQ8N3J5 372 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 GIPC2Q8TF65 315 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF594Q96JF6 807 aaPredicted RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CTNND1O60716 968 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 NR1D1P20393 614 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ART3Q13508 389 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 NRBP2Q9NSY0 501 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 RPAP1Q9BWH6 1393 aaPredicted RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 IQANK1A0A1B0GTG1 560 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 MAPK13O15264 365 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 FBXO18Q8NFZ0 1043 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 USP28Q96RU2 1077 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 PREX2Q70Z35 1606 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CDK12Q9NYV4 1490 aaPredicted RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ZAP70P43403 619 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 TMED2Q15363 201 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF658Q5TYW1 1059 aaPredicted RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 VSTM4Q8IW00 320 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CDC42BPAQ5VT25 1732 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 EXOC1LA0A1B0GW35 172 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 ARMCX5Q6P1M9 558 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 P2RX5Q93086 422 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 RPS6KC1Q96S38 1066 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 MT-ND3P03897 115 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 TTBK2Q6IQ55 1244 aa8.63□□□□□ -1.03
LIMD1-201ENST00000273317 MAGOHBQ96A72 148 aaKnown RBP8.63□□□□□ -1.03
LIMD1-201ENST00000273317 CHEK2O96017 543 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SERPING1P05155 500 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 DLATP10515 647 aaKnown RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 LRRC63Q05C16 580 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ZKSCAN8Q15776 578 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 GPATCH4Q5T3I0 446 aaKnown RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TEDDM1Q5T9Z0 273 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TTLL7Q6ZT98 887 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ZNF653Q96CK0 615 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 HSPD1P10809 573 aaKnown RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 SURF1Q15526 300 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 KRT24Q2M2I5 525 aa8.62□□□□□ -1.03
LIMD1-201ENST00000273317 TMED8Q6PL24 325 aaPredicted RBP8.62□□□□□ -1.03
LIMD1-201ENST00000273317 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms