RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 PARVBQ9HBI1 364 aa17.04■□□□□ 0.32
UBR3-201ENST00000272793 A0A087WUV0 522 aaPredicted RBP17.03■□□□□ 0.32
UBR3-201ENST00000272793 CAPN1P07384 714 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 TMTC1Q8IUR5 882 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 KITP10721 976 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 TUBGCP3Q96CW5 907 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 TMEM161AQ9NX61 479 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 RSRC2Q7L4I2 434 aaKnown RBP17.03■□□□□ 0.32
UBR3-201ENST00000272793 ARHGAP18Q8N392 663 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 TUBB6Q9BUF5 446 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 RAD18Q9NS91 495 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 RRP15Q9Y3B9 282 aaKnown RBP17.03■□□□□ 0.32
UBR3-201ENST00000272793 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 KRT74Q7RTS7 529 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 SUN2Q9UH99 717 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 EPHB1P54762 984 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 AKIRIN2Q53H80 203 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 FAM102BQ5T8I3 360 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 SNX21Q969T3 373 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 SRPK1Q96SB4 655 aaKnown RBP17.03■□□□□ 0.32
UBR3-201ENST00000272793 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.03■□□□□ 0.328e-10■□□□□ 9.6
UBR3-201ENST00000272793 MTERF3Q96E29 417 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 ADNPQ9H2P0 1102 aa17.03■□□□□ 0.32
UBR3-201ENST00000272793 NAIPQ13075 1403 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 KPNA2P52292 529 aaKnown RBP17.02■□□□□ 0.32
UBR3-201ENST00000272793 NELFCDQ8IXH7 590 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 TRIM58Q8NG06 486 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 MYH6P13533 1939 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 MAPK13O15264 365 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 ARHGAP17Q68EM7 881 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 FBXO18Q8NFZ0 1043 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 ZC3H12CQ9C0D7 883 aaKnown RBP17.02■□□□□ 0.32
UBR3-201ENST00000272793 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 MPP6Q9NZW5 540 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 IMPACTQ9P2X3 320 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 CDC40O60508 579 aaKnown RBP eCLIP17.02■□□□□ 0.32
UBR3-201ENST00000272793 NGLY1Q96IV0 654 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 TRAF3IP3Q9Y228 551 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 TCHHQ07283 1943 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 PRPF4O43172 522 aaKnown RBP eCLIP17.02■□□□□ 0.324e-6■■■□□ 15.3
UBR3-201ENST00000272793 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 SLC12A6Q9UHW9 1150 aa17.02■□□□□ 0.32
UBR3-201ENST00000272793 TOMM70O94826 608 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 PTPREP23469 700 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 MBIPQ9NS73 344 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 RNF103-CHMP3A0A140T963 221 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 SEC24DO94855 1032 aaPredicted RBP17.02■□□□□ 0.31
UBR3-201ENST00000272793 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.31
UBR3-201ENST00000272793 PLCG2P16885 1265 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 KRT73Q86Y46 540 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 CCDC103Q8IW40 242 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 TPH2Q8IWU9 490 aa17.02■□□□□ 0.31
UBR3-201ENST00000272793 SRRM1Q8IYB3 904 aaKnown RBP17.02■□□□□ 0.31
UBR3-201ENST00000272793 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 PLIN5Q00G26 463 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 TRIP4Q15650 581 aaPredicted RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 CRLF3Q8IUI8 442 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 RUBCNLQ9H714 662 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 ADA2Q9NZK5 511 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 ZNF202O95125 648 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 GNAT2P19087 354 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 BCL2L14Q9BZR8 327 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 BLZF1Q9H2G9 400 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 TSR3Q9UJK0 312 aaKnown RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 ARHGAP10A1A4S6 786 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 XRCC5P13010 732 aaKnown RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 DCDC2Q9UHG0 476 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 BTN2A1Q7KYR7 527 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 NME9Q86XW9 330 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 GYG2O15488 501 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 NARS2Q96I59 477 aaKnown RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 STK24Q9Y6E0 443 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 SNX2O60749 519 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 GADD45BO75293 160 aaPredicted RBP17.01■□□□□ 0.31
UBR3-201ENST00000272793 PDCD10Q9BUL8 212 aa17.01■□□□□ 0.31
UBR3-201ENST00000272793 EIF4E1BA6NMX2 242 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 HDLBPQ00341 1268 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 DYNC1I2Q13409 638 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 CCHCR1Q8TD31 782 aa17■□□□□ 0.31
UBR3-201ENST00000272793 CYP4F22Q6NT55 531 aa17■□□□□ 0.31
UBR3-201ENST00000272793 ABI1Q8IZP0 508 aa17■□□□□ 0.31
UBR3-201ENST00000272793 KIF1CO43896 1103 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 SEC24BO95487 1268 aa17■□□□□ 0.31
UBR3-201ENST00000272793 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 HESX1Q9UBX0 185 aa17■□□□□ 0.31
UBR3-201ENST00000272793 NFIBO00712 420 aa17■□□□□ 0.31
UBR3-201ENST00000272793 ZMYND10O75800 440 aa17■□□□□ 0.31
UBR3-201ENST00000272793 CDR2LQ86X02 465 aaPredicted RBP17■□□□□ 0.31
UBR3-201ENST00000272793 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
UBR3-201ENST00000272793 KRT6AP02538 564 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 301.8 ms