RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 SLC10A5Q5PT55 438 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 PNMA6FA0A0J9YX94 578 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 KIAA0753Q2KHM9 967 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 AK8Q96MA6 479 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 RTFDC1Q9BY42 306 aaPredicted RBP13.87□□□□□ -0.19
UBXN4-201ENST00000272638 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 KCPQ6ZWJ8 1503 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 C5P01031 1676 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 GOLGA6L10A6NI86 522 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 ANKRD65E5RJM6 399 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 DMTNQ08495 405 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 FUT2Q10981 343 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 TNIP1Q15025 636 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 DLGAP5Q15398 846 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 TBC1D5Q92609 795 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 ANO3Q9BYT9 981 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 HSD3B7Q9H2F3 369 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 CEP104O60308 925 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 ATP1A1P05023 1023 aaKnown RBP13.87□□□□□ -0.19
UBXN4-201ENST00000272638 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
UBXN4-201ENST00000272638 ASIC2Q16515 512 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 SHROOM1Q2M3G4 852 aaPredicted RBP13.87□□□□□ -0.19
UBXN4-201ENST00000272638 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 PACSIN2Q9UNF0 486 aaPredicted RBP13.87□□□□□ -0.19
UBXN4-201ENST00000272638 MRFAP1Q9Y605 127 aa13.87□□□□□ -0.19
UBXN4-201ENST00000272638 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 H0YHG0 523 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 PDE6BP35913 854 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 GPATCH4Q5T3I0 446 aaKnown RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 C8orf74Q6P047 294 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 TRIM65Q6PJ69 517 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 DNAAF5Q86Y56 855 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 COA1Q9GZY4 146 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 GJC1P36383 396 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 GFPT1Q06210 699 aaPredicted RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 CC2D1AQ6P1N0 951 aaPredicted RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 RNF225M0QZC1 329 aaPredicted RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 GAS7O60861 476 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 ALAS1P13196 640 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 CDC42EP5Q6NZY7 148 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 NOA1Q8NC60 698 aaKnown RBP13.86□□□□□ -0.19
UBXN4-201ENST00000272638 NOX5Q96PH1 765 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
UBXN4-201ENST00000272638 F5H6K3 240 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 LAD1O00515 517 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 KIF11P52732 1056 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ZBED6P86452 979 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 GABPB1Q06547 395 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 KLRC3Q07444 240 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 CERS3Q8IU89 383 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ZFPM1Q8IX07 1006 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 CTNNBL1Q8WYA6 563 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 EMILIN3Q9NT22 766 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 RGL1Q9NZL6 768 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 CCDC169A6NNP5 214 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ZBTB5O15062 677 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 EXOC3O60645 756 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 EPB41P11171 864 aaKnown RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 TMED8Q6PL24 325 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 BICD1Q96G01 975 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 MED15Q96RN5 788 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 NT5C3AQ9H0P0 336 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 GPR75-ASB3A0A0A6YYF3 556 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 APBA1Q02410 837 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 VWA3BQ502W6 1294 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 PROCA1Q8NCQ7 364 aaPredicted RBP13.85□□□□□ -0.19
UBXN4-201ENST00000272638 MTRQ99707 1265 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 THAP9Q9H5L6 903 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ARHGEF10LQ9HCE6 1279 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 CALCOCO1Q9P1Z2 691 aa13.85□□□□□ -0.19
UBXN4-201ENST00000272638 ARHGEF35A5YM69 484 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 HSPA1LP34931 641 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 U2AF1L4Q8WU68 220 aaKnown RBP13.84□□□□□ -0.19
UBXN4-201ENST00000272638 PCIF1Q9H4Z3 704 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 EHD2Q9NZN4 543 aa13.84□□□□□ -0.19
UBXN4-201ENST00000272638 ATP2C2O75185 946 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms