RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 TRIM45Q9H8W5 580 aaPredicted RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SMARCAL1Q9NZC9 954 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ABLIM1O14639 778 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ECEL1O95672 775 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 LAMC2Q13753 1193 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 EIF4A2Q14240 407 aaKnown RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 CASP8Q14790 479 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 RILPQ96NA2 401 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SIKE1Q9BRV8 207 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ANTXR1Q9H6X2 564 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SEL1LQ9UBV2 794 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SERPING1P05155 500 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 PFKFB1P16118 471 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 GSDMBQ8TAX9 411 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ZNF212Q9UDV6 495 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 MED7O43513 233 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 GEN1Q17RS7 908 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SPDYCQ5MJ68 293 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 PHACTR1Q9C0D0 580 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 UNC13AQ9UPW8 1703 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ADCY9O60503 1353 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 STXBP3O00186 592 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ATP2C2O75185 946 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 CHRNA3P32297 505 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SATB1Q01826 763 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 KPNA7A9QM74 516 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 MEIS1O00470 390 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 NLRX1Q86UT6 975 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 FRMD8P1Q9BZ68 369 aaPredicted RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 VWA3AA6NCI4 1184 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 AKNAD1Q5T1N1 836 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 USP6NLQ92738 828 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ROPN1BQ9BZX4 212 aaPredicted RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ROPN1Q9HAT0 212 aaPredicted RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 AATFQ9NY61 560 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 KIAA1210Q9ULL0 1709 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 CHEK2O96017 543 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 PRPSAP1Q14558 356 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 AGBL2Q5U5Z8 902 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 KLC3Q6P597 504 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 COPB1P53618 953 aaKnown RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SCG3Q8WXD2 468 aaKnown RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 MAP4K1Q92918 833 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 TIPINQ9BVW5 301 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 PDE11AQ9HCR9 933 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 DDX25Q9UHL0 483 aaKnown RBP5.34□□□□□ -1.55
HMCN1-201ENST00000271588 DAB2IPQ5VWQ8 1189 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 VPS39Q96JC1 886 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 SETDB2Q96T68 719 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 ARHGEF40Q8TER5 1519 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 PBRM1Q86U86 1689 aa5.34□□□□□ -1.55
HMCN1-201ENST00000271588 OR52Z1P0C646 297 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 CCT5P48643 541 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 GNPTABQ3T906 1256 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 EFL1Q7Z2Z2 1120 aaKnown RBP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 N4BP2L2Q92802 583 aaPredicted RBP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 STRIP2Q9ULQ0 834 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 ATXN2Q99700 1313 aaKnown RBP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 ABCA9Q8IUA7 1624 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 ADCY10Q96PN6 1610 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 IFNAR1P17181 557 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 FAM9CQ8IZT9 166 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 CHURC1Q8WUH1 139 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 RPS6KC1Q96S38 1066 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 KYAT1Q16773 422 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 ZNF658Q5TYW1 1059 aaPredicted RBP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 MPRIPQ6WCQ1 1025 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 PDE8AO60658 829 aa5.34□□□□□ -1.56
HMCN1-201ENST00000271588 RSBN1LQ6PCB5 846 aaPredicted RBP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.34□□□□□ -1.56
HMCN1-201ENST00000271588 PTK2Q05397 1052 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 TRMT10CQ7L0Y3 403 aaKnown RBP5.33□□□□□ -1.56
HMCN1-201ENST00000271588 RIN3Q8TB24 985 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 WDR11Q9BZH6 1224 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 ADAM21Q9UKJ8 722 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 ZNF521Q96K83 1311 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
HMCN1-201ENST00000271588 CLTAP09496 248 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 IL2RBP14784 551 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 AP3M2P53677 418 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 DEFA1P59665 94 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 DEFA3P59666 94 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 ASPRV1Q53RT3 343 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 C2CD5Q86YS7 1000 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 CCDC138Q96M89 665 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 UBN1Q9NPG3 1134 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 TBC1D23Q9NUY8 699 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 DTNBO60941 627 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 DNA2P51530 1060 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 WDR17Q8IZU2 1322 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 GPC4O75487 556 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 POLD1P28340 1107 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 BASP1P80723 227 aaKnown RBP5.33□□□□□ -1.56
HMCN1-201ENST00000271588 CEP170Q5SW79 1584 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 CDC42BPAQ5VT25 1732 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 ERVV-2B6SEH9 535 aa5.33□□□□□ -1.56
HMCN1-201ENST00000271588 STRNO43815 780 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms