RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 SLC26A4O43511 780 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 TDP2O95551 362 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 ICAM1P05362 532 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 GHRHRQ02643 423 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 PRRT2Q7Z6L0 340 aaPredicted RBP17.32■□□□□ 0.36
COPS3-201ENST00000268717 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 DDX25Q9UHL0 483 aaKnown RBP17.32■□□□□ 0.36
COPS3-201ENST00000268717 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 BECN2A8MW95 431 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 IKBKBO14920 756 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 SLC37A4O43826 429 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 CYP3A4P08684 503 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 VCAM1P19320 739 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 CIITAP33076 1130 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 DGKZQ13574 1117 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 SARM1Q6SZW1 724 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 ANKRD23Q86SG2 305 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 DHX40Q8IX18 779 aaKnown RBP17.32■□□□□ 0.36
COPS3-201ENST00000268717 ZFYVE28Q9HCC9 887 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
COPS3-201ENST00000268717 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 TBX3O15119 743 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 DPYDQ12882 1025 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 MTMR2Q13614 643 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 MORC3Q14149 939 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 Q4G0T1 1027 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
COPS3-201ENST00000268717 MLKLQ8NB16 471 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 EHMT1Q9H9B1 1298 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 KCNMB3Q9NPA1 279 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 PPP1R9AQ9ULJ8 1098 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 LOC285556D6RIA3 1793 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 SMCHD1A6NHR9 2005 aa17.31■□□□□ 0.36
COPS3-201ENST00000268717 GCOM1H8Y6P7 765 aaPredicted RBP17.3■□□□□ 0.36
COPS3-201ENST00000268717 GTPBP6O43824 516 aaPredicted RBP17.3■□□□□ 0.36
COPS3-201ENST00000268717 ADCY5O95622 1261 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 POLR2MP0CAP2 368 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 STAT6P42226 847 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 FASTKD5Q7L8L6 764 aaKnown RBP17.3■□□□□ 0.36
COPS3-201ENST00000268717 CABP7Q86V35 215 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
COPS3-201ENST00000268717 SLC38A10Q9HBR0 1119 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 FBXO28Q9NVF7 368 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 MAP3K20Q9NYL2 800 aaKnown RBP17.3■□□□□ 0.36
COPS3-201ENST00000268717 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
COPS3-201ENST00000268717 BIN1O00499 593 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 PRR29P0C7W0 189 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 SPP2Q13103 211 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 GPAT2Q6NUI2 795 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 CCDC174Q6PII3 467 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 ABHD8Q96I13 439 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 ZNF536O15090 1300 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 PDHXO00330 501 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 TLR2O60603 784 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 TAL1P17542 331 aaPredicted RBP17.29■□□□□ 0.36
COPS3-201ENST00000268717 TECP42680 631 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 TXKP42681 527 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 TPM4P67936 248 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 KARSQ15046 597 aaKnown RBP17.29■□□□□ 0.36
COPS3-201ENST00000268717 NAALADL2Q58DX5 795 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 MCF2L2Q86YR7 1114 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 HAS1Q92839 578 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
COPS3-201ENST00000268717 MAF1Q9H063 256 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
COPS3-201ENST00000268717 MYH7BA7E2Y1 1941 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.28■□□□□ 0.36
COPS3-201ENST00000268717 HSD17B4P51659 736 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 SP3Q02447 781 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.28■□□□□ 0.36
COPS3-201ENST00000268717 GRAMD1CQ8IYS0 662 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 AOPEPQ8N6M6 819 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 RASSF8Q8NHQ8 419 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
COPS3-201ENST00000268717 KBTBD4Q9NVX7 518 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 RMND1Q9NWS8 449 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 STK17AQ9UEE5 414 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 CCPG1Q9ULG6 757 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
COPS3-201ENST00000268717 MYPNQ86TC9 1320 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 ZBED4O75132 1171 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 FLOT1O75955 427 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 BMP6P22004 513 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 OAZ1P54368 228 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 MMTAG2Q9BU76 263 aaKnown RBP17.27■□□□□ 0.36
COPS3-201ENST00000268717 GTPBP4Q9BZE4 634 aaKnown RBP17.27■□□□□ 0.36
COPS3-201ENST00000268717 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms