RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PNMA5Q96PV4 448 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 KCNH4Q9UQ05 1017 aa18.43■□□□□ 0.54
TPM1-201ENST00000267996 RBBP6Q7Z6E9 1792 aaKnown RBP18.43■□□□□ 0.54
TPM1-201ENST00000267996 SPDYE16A6NNV3 312 aaPredicted RBP18.42■□□□□ 0.54
TPM1-201ENST00000267996 CASP1P29466 404 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 SPIRE1Q08AE8 756 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 PPIL2Q13356 520 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 TMEM119Q4V9L6 283 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 KRT79Q5XKE5 535 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 ARMC9Q7Z3E5 817 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 AOPEPQ8N6M6 819 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
TPM1-201ENST00000267996 SYTL5Q8TDW5 730 aaPredicted RBP18.42■□□□□ 0.54
TPM1-201ENST00000267996 STAMQ92783 540 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 GJA10Q969M2 543 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 MAF1Q9H063 256 aa18.42■□□□□ 0.54
TPM1-201ENST00000267996 BECN2A8MW95 431 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 GOLGA6L19H0YKK7 550 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 IRF6O14896 467 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 IKBKBO14920 756 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 MSH4O15457 936 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 ADCY5O95622 1261 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
TPM1-201ENST00000267996 ZNF76P36508 570 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 CUL4BQ13620 913 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 TMEM132BQ14DG7 1078 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 NCAPHQ15003 741 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 CT47A1Q5JQC4 288 aaPredicted RBP18.41■□□□□ 0.54
TPM1-201ENST00000267996 CYP2W1Q8TAV3 490 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 NUDT12Q9BQG2 462 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 STK17AQ9UEE5 414 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 UNCXA6NJT0 531 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 POTEIP0CG38 1075 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 POTEJP0CG39 1038 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 SEMA3FQ13275 785 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 TTLL12Q14166 644 aaPredicted RBP18.41■□□□□ 0.54
TPM1-201ENST00000267996 TKFCQ3LXA3 575 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 CEP55Q53EZ4 464 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 TREML2Q5T2D2 321 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 SARM1Q6SZW1 724 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 SNX29Q8TEQ0 813 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 PLIN2Q99541 437 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 RNF146Q9NTX7 359 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
TPM1-201ENST00000267996 MEIS1O00470 390 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 RPS6P62753 249 aaKnown RBP18.4■□□□□ 0.54
TPM1-201ENST00000267996 OTUD5Q96G74 571 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 BLZF1Q9H2G9 400 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 HOMER2Q9NSB8 354 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 DACH1Q9UI36 760 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 VAV3Q9UKW4 847 aa18.4■□□□□ 0.54
TPM1-201ENST00000267996 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.53
TPM1-201ENST00000267996 NIPA1Q7RTP0 329 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 SLC5A5Q92911 643 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 C7orf25Q9BPX7 421 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 A0A0G2JMZ2 1700 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
TPM1-201ENST00000267996 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
TPM1-201ENST00000267996 MOGSQ13724 837 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 KCNB1Q14721 858 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 POTEEQ6S8J3 1075 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 RNF207Q6ZRF8 634 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 PLA2G4DQ86XP0 818 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 MXRA8Q9BRK3 442 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 RMND1Q9NWS8 449 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 STK24Q9Y6E0 443 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 KLRC4O43908 158 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 BCRP11274 1271 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 UBXN2AP68543 259 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 SETQ01105 290 aaPredicted RBP18.38■□□□□ 0.53
TPM1-201ENST00000267996 MYL5Q02045 173 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 ECM1Q16610 540 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 MAP1SQ66K74 1059 aaPredicted RBP18.38■□□□□ 0.53
TPM1-201ENST00000267996 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 CDK5RAP3Q96JB5 506 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 TAAR1Q96RJ0 339 aa18.38■□□□□ 0.53
TPM1-201ENST00000267996 PSMD10O75832 226 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
TPM1-201ENST00000267996 CCT6AP40227 531 aaKnown RBP18.37■□□□□ 0.53
TPM1-201ENST00000267996 STAT3P40763 770 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 AMPD3Q01432 767 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 CNNM4Q6P4Q7 775 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 IL31RAQ8NI17 732 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 RAD54LQ92698 747 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 OPTNQ96CV9 577 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 UIMC1Q96RL1 719 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 TRIM9Q9C026 710 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
TPM1-201ENST00000267996 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
TPM1-201ENST00000267996 UBIAD1Q9Y5Z9 338 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms