RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
PRPF6-201ENST00000266079 RIOX1Q9H6W3 641 aa14.15□□□□□ -0.14
PRPF6-201ENST00000266079 AS3MTQ9HBK9 375 aa14.15□□□□□ -0.14
PRPF6-201ENST00000266079 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
PRPF6-201ENST00000266079 MYH6P13533 1939 aa14.15□□□□□ -0.14
PRPF6-201ENST00000266079 EIF3CLB5ME19 914 aaKnown RBP14.15□□□□□ -0.15
PRPF6-201ENST00000266079 STX10O60499 249 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 EIF3JO75822 258 aaKnown RBP14.15□□□□□ -0.15
PRPF6-201ENST00000266079 MMP1P03956 469 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 EARS2Q5JPH6 523 aaKnown RBP14.15□□□□□ -0.15
PRPF6-201ENST00000266079 FOXR1Q6PIV2 292 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 OPTNQ96CV9 577 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 WNK4Q96J92 1243 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 EIF3CQ99613 913 aaKnown RBP14.15□□□□□ -0.15
PRPF6-201ENST00000266079 LZTS2Q9BRK4 669 aa14.15□□□□□ -0.15
PRPF6-201ENST00000266079 TBX2Q13207 712 aaPredicted RBP14.14□□□□□ -0.15
PRPF6-201ENST00000266079 SRGAP1Q7Z6B7 1085 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 GBA2Q9HCG7 927 aaPredicted RBP14.14□□□□□ -0.15
PRPF6-201ENST00000266079 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 POTEB2H3BUK9 544 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 PFKFB1P16118 471 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 CMA1P23946 247 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 CHMP4BP1P59074 171 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 TOGARAM2Q6ZUX3 1019 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 TEX2Q8IWB9 1127 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 SLC10A4Q96EP9 437 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 RAB21Q9UL25 225 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 AFG3L2Q9Y4W6 797 aa14.14□□□□□ -0.15
PRPF6-201ENST00000266079 SMCHD1A6NHR9 2005 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 STXBP3O00186 592 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 ZBTB5O15062 677 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 CCDC12Q8WUD4 166 aaPredicted RBP14.13□□□□□ -0.15
PRPF6-201ENST00000266079 ANKZF1Q9H8Y5 726 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 FAN1Q9Y2M0 1017 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 PCDHA1Q9Y5I3 950 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 CUTAO60888 179 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 AXDND1Q5T1B0 1012 aaPredicted RBP14.13□□□□□ -0.15
PRPF6-201ENST00000266079 CST9Q5W186 159 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 BARHL2Q9NY43 387 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 L1RE1Q9UN81 338 aa14.13□□□□□ -0.15
PRPF6-201ENST00000266079 ERLIN1O75477 346 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 ECM2O94769 699 aaPredicted RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 CORO7P57737 925 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 UBE2SQ16763 222 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 MSANTD4Q8NCY6 345 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 PHF20Q9BVI0 1012 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 ZSWIM4Q9H7M6 989 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 INTS13Q9NVM9 706 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 BIN2Q9UBW5 565 aaPredicted RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 PNMA6FA0A0J9YX94 578 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 ITGBL1O95965 494 aaPredicted RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 CHRM1P11229 460 aaPredicted RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 PIK3AP1Q6ZUJ8 805 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 C2orf69Q8N8R5 385 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 NCAPGQ9BPX3 1015 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 FANCLQ9NW38 375 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 N4BP1O75113 896 aaKnown RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 KRT2P35908 639 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 GJA5P36382 358 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 HUNKP57058 714 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 NPY5RQ15761 445 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
PRPF6-201ENST00000266079 ERO1BQ86YB8 467 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 PDILTQ8N807 584 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 TC2NQ8N9U0 490 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 ATG4CQ96DT6 458 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L15C9J2P7 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L13C9JLJ4 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L11C9JVI0 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L18D6R9N7 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L22D6RA61 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L17D6RBQ6 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L19D6RCP7 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L20D6RJB6 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP14P54578 494 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L24Q0WX57 530 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 KARSQ15046 597 aaKnown RBP14.11□□□□□ -0.15
PRPF6-201ENST00000266079 USP17L6PQ6QN14 398 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 CEP112Q8N8E3 955 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 CHURC1Q8WUH1 139 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
PRPF6-201ENST00000266079 WDR46O15213 610 aaKnown RBP14.11□□□□□ -0.15
PRPF6-201ENST00000266079 LRRC31Q6UY01 552 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 BRAPQ7Z569 592 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 PNKPQ96T60 521 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 MYCBPQ99417 103 aaPredicted RBP14.11□□□□□ -0.15
PRPF6-201ENST00000266079 ABCB6Q9NP58 842 aa14.11□□□□□ -0.15
PRPF6-201ENST00000266079 PLS1Q14651 629 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms