RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 ZNF713Q8N859 430 aaPredicted RBP9.69□□□□□ -0.86
ERCC8-201ENST00000265038 SLC26A6Q9BXS9 759 aa9.69□□□□□ -0.86
ERCC8-201ENST00000265038 RNF26Q9BY78 433 aaPredicted RBP9.69□□□□□ -0.86
ERCC8-201ENST00000265038 AP5M1Q9H0R1 490 aa9.69□□□□□ -0.86
ERCC8-201ENST00000265038 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
ERCC8-201ENST00000265038 SMCO2A6NFE2 343 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 H0YGN5 161 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 ADAMTS3O15072 1205 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 NKRFO15226 690 aaKnown RBP eCLIP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PFKFB2O60825 505 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 CCND2P30279 289 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 SNX17Q15036 470 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 FSCN1Q16658 493 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PRPF38BQ5VTL8 546 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PCSK9Q8NBP7 692 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 C22orf23Q9BZE7 217 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 DDX41Q9UJV9 622 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PCDHA6Q9UN73 950 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PCDHA8Q9Y5H6 950 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 LCTP09848 1927 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 PLXNA1Q9UIW2 1896 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 LARGE1O95461 756 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 ADCY7P51828 1080 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 RTP1P59025 263 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 ME3Q16798 604 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 C1orf53Q5VUE5 145 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 OR6J1Q8NGC5 347 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 SLKQ9H2G2 1235 aaPredicted RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 STARD7Q9NQZ5 370 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
ERCC8-201ENST00000265038 NR2E3Q9Y5X4 410 aa9.68□□□□□ -0.86
ERCC8-201ENST00000265038 CPLX1O14810 134 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 DTNBO60941 627 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 CTDNEP1O95476 244 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
ERCC8-201ENST00000265038 AKAP17AQ02040 695 aaKnown RBP9.67□□□□□ -0.86
ERCC8-201ENST00000265038 SP2Q02086 613 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 ARHGAP1Q07960 439 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
ERCC8-201ENST00000265038 TRIM60Q495X7 471 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 PCNX4Q63HM2 1172 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 CXCL17Q6UXB2 119 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 PGBD1Q96JS3 809 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 INPP4AQ96PE3 977 aaPredicted RBP9.67□□□□□ -0.86
ERCC8-201ENST00000265038 ZMYND12Q9H0C1 365 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 TMEM260Q9NX78 707 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 MRVI1Q9Y6F6 885 aa9.67□□□□□ -0.86
ERCC8-201ENST00000265038 BAZ2BQ9UIF8 2168 aaKnown RBP9.67□□□□□ -0.86
ERCC8-201ENST00000265038 ESYT2A0FGR8 921 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 SPDYE3A6NKU9 549 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ZEB2O60315 1214 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 STAM2O75886 525 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 GH1P01241 217 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ICAM3P32942 547 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 SEMA3FQ13275 785 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 XRRA1Q6P2D8 792 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 TEX2Q8IWB9 1127 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 NECAB1Q8N987 351 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 GLT1D1Q96MS3 346 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 BCAS3Q9H6U6 928 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 VPS54Q9P1Q0 977 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ATP11BQ9Y2G3 1177 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 ELP1O95163 1332 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 A6NJR5 290 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 SPATA31C2B4DYI2 1134 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 TGFB3P10600 412 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 SYN1P17600 705 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 CPT1AP50416 773 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 CDK7P50613 346 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 KCNV1Q6PIU1 500 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 AFG1LQ8WV93 481 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 GLT8D2Q9H1C3 349 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 GRIN2DO15399 1336 aa9.66□□□□□ -0.86
ERCC8-201ENST00000265038 A0A0U1RQG5 324 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 ARVCFO00192 962 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 CABYRO75952 493 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 DEXIO95424 95 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 FOSP01100 380 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 MYL3P08590 195 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 ITGB5P18084 799 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 UBA1P22314 1058 aaKnown RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 PSMC6P62333 389 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 PURAQ00577 322 aaKnown RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 TLE2Q04725 743 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 CELF3Q5SZQ8 465 aaKnown RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 JAKMIP3Q5VZ66 844 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 SLC43A3Q8NBI5 491 aa9.65□□□□□ -0.86
ERCC8-201ENST00000265038 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-201ENST00000265038 EMID1Q96A84 441 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms