RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NBPF20Q3BBV1 942 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 ADCK5Q3MIX3 580 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 FAM109BQ6ICB4 259 aaPredicted RBP18.58■□□□□ 0.56
USE1-201ENST00000263897 Q7L0L9 218 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 C16orf59Q7L2K0 433 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 DHX32Q7L7V1 743 aaKnown RBP18.58■□□□□ 0.56
USE1-201ENST00000263897 CMTR1Q8N1G2 835 aaKnown RBP18.58■□□□□ 0.56
USE1-201ENST00000263897 AFG1LQ8WV93 481 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 SEC63Q9UGP8 760 aaKnown RBP18.58■□□□□ 0.56
USE1-201ENST00000263897 SCN10AQ9Y5Y9 1956 aa18.58■□□□□ 0.56
USE1-201ENST00000263897 MYH7BA7E2Y1 1941 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 NEFLP07196 543 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 SUPT20HL2P0C7V6 817 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 CSF2RAP15509 400 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 KRT32Q14532 448 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 KCNV1Q6PIU1 500 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 SYNE3Q6ZMZ3 975 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 RAB11FIP4Q86YS3 637 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 IL31RAQ8NI17 732 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 RNPC3Q96LT9 517 aaKnown RBP18.57■□□□□ 0.56
USE1-201ENST00000263897 HIPK3Q9H422 1215 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 MRVI1Q9Y6F6 885 aa18.57■□□□□ 0.56
USE1-201ENST00000263897 MMP3P08254 477 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 CCND2P30279 289 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 LAMC2Q13753 1193 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 NFRKBQ6P4R8 1299 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 KCNB2Q92953 911 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 EMID1Q96A84 441 aaPredicted RBP18.56■□□□□ 0.56
USE1-201ENST00000263897 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.56■□□□□ 0.56
USE1-201ENST00000263897 NOC4LQ9BVI4 516 aaKnown RBP18.56■□□□□ 0.56
USE1-201ENST00000263897 MTMR10Q9NXD2 777 aa18.56■□□□□ 0.56
USE1-201ENST00000263897 TGFB3P10600 412 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 SMAD3P84022 425 aaKnown RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 PTPN11Q06124 597 aaPredicted RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 TMEM240Q5SV17 173 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 APOA5Q6Q788 366 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 USP17L6PQ6QN14 398 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 TMTC3Q6ZXV5 915 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 CCDC82Q8N4S0 544 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 ZFP91Q96JP5 570 aaPredicted RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
USE1-201ENST00000263897 TRMT13Q9NUP7 481 aaKnown RBP18.55■□□□□ 0.56
USE1-201ENST00000263897 UMODL1Q5DID0 1318 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 PIK3CDO00329 1044 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 MEIS2O14770 477 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 HMGB1P09429 215 aaKnown RBP18.54■□□□□ 0.56
USE1-201ENST00000263897 DGKDQ16760 1214 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 FAM47CQ5HY64 1035 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 MYSM1Q5VVJ2 828 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 MICU3Q86XE3 530 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 SMARCC2Q8TAQ2 1214 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 KAT2BQ92831 832 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 CUL5Q93034 780 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 IL23AQ9NPF7 189 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 BRPF3Q9ULD4 1205 aa18.54■□□□□ 0.56
USE1-201ENST00000263897 FRMPD4Q14CM0 1322 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
USE1-201ENST00000263897 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
USE1-201ENST00000263897 hCG_1642624A0A1W2PR95 340 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 STAM2O75886 525 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 ACRP10323 421 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 CYP2C9P11712 490 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 HSPA4P34932 840 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 CCL23P55773 120 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 MRPS9P82933 396 aaKnown RBP18.53■□□□□ 0.56
USE1-201ENST00000263897 SP2Q02086 613 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 CELF3Q5SZQ8 465 aaKnown RBP18.53■□□□□ 0.56
USE1-201ENST00000263897 ZNF365Q70YC5 407 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 PPTC7Q8NI37 304 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 PPP1R13LQ8WUF5 828 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 PSTPIP2Q9H939 334 aa18.53■□□□□ 0.56
USE1-201ENST00000263897 ZBTB43O43298 467 aa18.52■□□□□ 0.56
USE1-201ENST00000263897 PPFIA4O75335 1185 aa18.52■□□□□ 0.56
USE1-201ENST00000263897 CHMP4BP1P59074 171 aa18.52■□□□□ 0.56
USE1-201ENST00000263897 RASIP1Q5U651 963 aa18.52■□□□□ 0.56
USE1-201ENST00000263897 PSRC1Q6PGN9 363 aaPredicted RBP18.52■□□□□ 0.56
USE1-201ENST00000263897 GPKOWQ92917 476 aaPredicted RBP eCLIP18.52■□□□□ 0.56
USE1-201ENST00000263897 INPP4AQ96PE3 977 aaPredicted RBP18.52■□□□□ 0.56
USE1-201ENST00000263897 WNT8AQ9H1J5 351 aa18.52■□□□□ 0.56
USE1-201ENST00000263897 RBM28Q9NW13 759 aaKnown RBP18.52■□□□□ 0.56
USE1-201ENST00000263897 SPATA31C2B4DYI2 1134 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 REC8O95072 547 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 GGPS1O95749 300 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 FGBP02675 491 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 HOXD8P13378 290 aaPredicted RBP18.51■□□□□ 0.55
USE1-201ENST00000263897 ICAM3P32942 547 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 GNPTABQ3T906 1256 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 XRRA1Q6P2D8 792 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 RTEL1Q9NZ71 1219 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
USE1-201ENST00000263897 KLF18A0A0U1RQI7 1052 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 CPA1P15085 419 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 UBA1P22314 1058 aaKnown RBP18.5■□□□□ 0.55
USE1-201ENST00000263897 FUT2Q10981 343 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 RTN1Q16799 776 aa18.5■□□□□ 0.55
USE1-201ENST00000263897 HSDL1Q3SXM5 330 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms