RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ERVV-1B6SEH8 477 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 PRKAB2O43741 272 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 ZFXP17010 805 aaPredicted RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 ATP5JP18859 108 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 GNAT2P19087 354 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 HMGB2P26583 209 aaKnown RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 ALDH3A1P30838 453 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 KCNJ6P48051 423 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 USP14P54578 494 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 SCARF1Q14162 830 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 NKX1-1Q15270 411 aaPredicted RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 SPA17Q15506 151 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 FAM47EQ6ZV65 393 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 MAP7D3Q8IWC1 876 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 MSANTD4Q8NCY6 345 aa9.18□□□□□ -0.94
LDB3-201ENST00000263066 NSRP1Q9H0G5 558 aaKnown RBP9.18□□□□□ -0.94
LDB3-201ENST00000263066 A0A1B0GVG6 124 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 KRT86O43790 486 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 RNF8O76064 485 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 FESP07332 822 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 CCT6AP40227 531 aaKnown RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 NDUFA8P51970 172 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PAK2Q13177 524 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 MED1Q15648 1581 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 FAM47AQ5JRC9 791 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 TSHZ1Q6ZSZ6 1077 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.17□□□□□ -0.94
LDB3-201ENST00000263066 LBHD1Q9BQE6 289 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 DDX23Q9BUQ8 820 aaKnown RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 RAB21Q9UL25 225 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 SPTLC2O15270 562 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 E2F6O75461 281 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 LDHCP07864 332 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 KLC1Q07866 573 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.17□□□□□ -0.94
LDB3-201ENST00000263066 CFAP157Q5JU67 520 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 GET4Q7L5D6 327 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 HIC2Q96JB3 615 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 TRIM7Q9C029 511 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 PCDHGC5Q9Y5F6 944 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 HIP1O00291 1037 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 GPAA1O43292 621 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 XBP1P17861 261 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 MAGEA10P43363 369 aaPredicted RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 IFNAR2P48551 515 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 ZBED6P86452 979 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PLS1Q14651 629 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PTGISQ16647 500 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 TXNRD3Q86VQ6 643 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 PROM2Q8N271 834 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 CEP70Q8NHQ1 597 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 TTC14Q96N46 770 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 USP40Q9NVE5 1235 aa9.17□□□□□ -0.94
LDB3-201ENST00000263066 TMA7Q9Y2S6 64 aaKnown RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
LDB3-201ENST00000263066 ROBO1Q9Y6N7 1651 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 B4E1Z4 1266 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 GCLCP48506 637 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 RAD23BP54727 409 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 GPSM2P81274 684 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 DMPKQ09013 629 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 DNAJC14Q6Y2X3 702 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 ZC3H18Q86VM9 953 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 NAF1Q96HR8 494 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 NUP58Q9BVL2 599 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 CRNKL1Q9BZJ0 848 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 TSC22D4Q9Y3Q8 395 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 A0A0D9SFI3 127 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 CTNND1O60716 968 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 FAM107AO95990 144 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 VIL1P09327 827 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 RASSF7Q02833 373 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 GRAPQ13588 217 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 KRT71Q3SY84 523 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 CNGA4Q8IV77 575 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 RBM12BQ8IXT5 1001 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 ELOA2Q8IYF1 753 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 KIF2BQ8N4N8 673 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 GRAPLQ8TC17 118 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 DYDC2Q96IM9 177 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 ISCA1Q9BUE6 129 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 RGS17Q9UGC6 210 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 OPHN1O60890 802 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 NPM3O75607 178 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 MRPS35P82673 323 aaKnown RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 RASGRF1Q13972 1273 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 MFSD6Q6ZSS7 791 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms