RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TTBK2Q6IQ55 1244 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 MMS22LQ6ZRQ5 1243 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 TADA2BQ86TJ2 420 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 CNOT6LQ96LI5 555 aaKnown RBP25.12■■□□□ 1.61
MCF2L-201ENST00000261963 ZC3H12CQ9C0D7 883 aaKnown RBP25.12■■□□□ 1.61
MCF2L-201ENST00000261963 SWAP70Q9UH65 585 aa25.12■■□□□ 1.61
MCF2L-201ENST00000261963 PNMA6FA0A0J9YX94 578 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 NKRFO15226 690 aaKnown RBP eCLIP25.11■■□□□ 1.61
MCF2L-201ENST00000261963 RNF40O75150 1001 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 TRIM37O94972 964 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 DOK7Q18PE1 504 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 CDC42EP5Q6NZY7 148 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 FAM107BQ9H098 131 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 MYO3BQ8WXR4 1341 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 ANKRD31Q8N7Z5 1873 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 MYMKA6NI61 221 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 SEMA6BQ9H3T3 888 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 VIPAS39Q9H9C1 493 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 RIC8AQ9NPQ8 531 aa25.11■■□□□ 1.61
MCF2L-201ENST00000261963 C10orf71Q711Q0 1435 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 SLURP2P0DP57 97 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 CNNM4Q6P4Q7 775 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 SV2BQ7L1I2 683 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 POTEMA6NI47 508 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 PPP1R2P41236 205 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 KLK7P49862 253 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 UBE2SQ16763 222 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 MIIPQ5JXC2 388 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 APOBEC3HQ6NTF7 200 aaKnown RBP25.1■■□□□ 1.61
MCF2L-201ENST00000261963 PPP1R18Q6NYC8 613 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 WDR93Q6P2C0 686 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 NAPGQ99747 312 aaPredicted RBP25.1■■□□□ 1.61
MCF2L-201ENST00000261963 NUDT12Q9BQG2 462 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 STK17AQ9UEE5 414 aa25.1■■□□□ 1.61
MCF2L-201ENST00000261963 TNNI2P48788 182 aa25.09■■□□□ 1.61
MCF2L-201ENST00000261963 CLK2P49760 499 aaKnown RBP25.09■■□□□ 1.61
MCF2L-201ENST00000261963 MCTP2Q6DN12 878 aa25.09■■□□□ 1.61
MCF2L-201ENST00000261963 SLC39A2Q9NP94 309 aa25.09■■□□□ 1.61
MCF2L-201ENST00000261963 MYO1AQ9UBC5 1043 aa25.09■■□□□ 1.61
MCF2L-201ENST00000261963 AARSP49588 968 aaKnown RBP eCLIP25.08■■□□□ 1.61
MCF2L-201ENST00000261963 NFIAQ12857 509 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 MEA1Q16626 185 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 SWT1Q5T5J6 900 aaKnown RBP25.08■■□□□ 1.61
MCF2L-201ENST00000261963 MICALL1Q8N3F8 863 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 AGPAT5Q9NUQ2 364 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 TFRCP02786 760 aaKnown RBP25.08■■□□□ 1.61
MCF2L-201ENST00000261963 SLC16A2P36021 539 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 PDIA5Q14554 519 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 TMEM266Q2M3C6 531 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 CENPPQ6IPU0 288 aa25.08■■□□□ 1.61
MCF2L-201ENST00000261963 LARP4BQ92615 738 aaKnown RBP25.08■■□□□ 1.61
MCF2L-201ENST00000261963 ADAMTSL1Q8N6G6 1762 aa25.08■■□□□ 1.6
MCF2L-201ENST00000261963 TBC1D8BQ0IIM8 1120 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 UNC13DQ70J99 1090 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 CCDC91Q7Z6B0 441 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 FAM114A1Q8IWE2 563 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 ZSCAN29Q8IWY8 852 aaPredicted RBP25.07■■□□□ 1.6
MCF2L-201ENST00000261963 TRIM10Q9UDY6 481 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 SYF2O95926 243 aaKnown RBP25.07■■□□□ 1.6
MCF2L-201ENST00000261963 PPP4R3AQ6IN85 833 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 HHIPL2Q6UWX4 724 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 KCNK18Q7Z418 384 aa25.07■■□□□ 1.6
MCF2L-201ENST00000261963 MTIF2P46199 727 aaKnown RBP25.06■■□□□ 1.6
MCF2L-201ENST00000261963 HERVK_113P62684 666 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 ZFPM1Q8IX07 1006 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 GPATCH11Q8N954 259 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 RAD54LQ92698 747 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 MTMR8Q96EF0 704 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 PVALEFA0A1B0GWK0 134 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 USP17L10C9JJH3 530 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 NPR1P16066 1061 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 TMEM119Q4V9L6 283 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 KCTD1Q719H9 257 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 NOA1Q8NC60 698 aaKnown RBP25.06■■□□□ 1.6
MCF2L-201ENST00000261963 SNX29Q8TEQ0 813 aa25.06■■□□□ 1.6
MCF2L-201ENST00000261963 NOC4LQ9BVI4 516 aaKnown RBP25.06■■□□□ 1.6
MCF2L-201ENST00000261963 PRPF6O94906 941 aaKnown RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 GPATCH4Q5T3I0 446 aaKnown RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 DYMQ7RTS9 669 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 RETREG2Q8NC44 543 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 HAS1Q92839 578 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 CDK5RAP3Q96JB5 506 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 CEP89Q96ST8 783 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 DNAJC18Q9H819 358 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 MPHOSPH10O00566 681 aaKnown RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 TRIM21P19474 475 aaKnown RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 AMPD2Q01433 879 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 ECM1Q16610 540 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 CCDC96Q2M329 555 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 TEKT1Q969V4 418 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 ERGIC2Q96RQ1 377 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 NUP58Q9BVL2 599 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 RAB34Q9BZG1 259 aa25.05■■□□□ 1.6
MCF2L-201ENST00000261963 QTRT2Q9H974 415 aaKnown RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 GREB1LQ9C091 1923 aaPredicted RBP25.05■■□□□ 1.6
MCF2L-201ENST00000261963 ZBTB5O15062 677 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 MMP14P50281 582 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 ATP2B2Q01814 1243 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 CUL5Q93034 780 aa25.04■■□□□ 1.6
MCF2L-201ENST00000261963 HLA-DOAP06340 250 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms