RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 NSMFQ6X4W1 530 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 SESTD1Q86VW0 696 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 TEX9Q8N6V9 391 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 FMO2Q99518 471 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 KRT19P08727 400 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 PDE6CP51160 858 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 PPP2R5BQ15173 497 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 C19orf44Q9H6X5 657 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
SLC6A4-201ENST00000261707 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 GPAA1O43292 621 aa11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 TOM1L1O75674 476 aa11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 RPS6KC1Q96S38 1066 aa11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 POLIQ9UNA4 740 aa11.65□□□□□ -0.55
SLC6A4-201ENST00000261707 CDK13Q14004 1512 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 MT-ND3P03897 115 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 ECE1P42892 770 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 ENOX1Q8TC92 643 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 TUBGCP2Q9BSJ2 902 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 NHEJ1Q9H9Q4 299 aaPredicted RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 SGK1O00141 431 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 GSTA4O15217 222 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 PDE1BQ01064 536 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 DRP2Q13474 957 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 APPBP2Q92624 585 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 STAMBPL1Q96FJ0 436 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 WARS2Q9UGM6 360 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 KRT75O95678 551 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 LMNB1P20700 586 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 ADCY7P51828 1080 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 RDH13Q8NBN7 331 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 DDX28Q9NUL7 540 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 PLS3P13797 630 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 CD19P15391 556 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 KRT33BQ14525 404 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 TRIM15Q9C019 465 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 PIDD1Q9HB75 910 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 PMS1P54277 932 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 FBXW4P57775 412 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 NOP14P78316 857 aaKnown RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 NAA30Q147X3 362 aaPredicted RBP11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
SLC6A4-201ENST00000261707 SORBS3O60504 671 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 MESDQ14696 234 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 HP1BP3Q5SSJ5 553 aaPredicted RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 A0A0G2JND7 137 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 KRT14P02533 472 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 STAT2P52630 851 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 DR1Q01658 176 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 SGO2Q562F6 1265 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 SMYD2Q9NRG4 433 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PCDHA13Q9Y5I0 950 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 EXOC1LA0A1B0GW35 172 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 NDUFA10O95299 355 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 TMED10P49755 219 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 CYP2J2P51589 502 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 ARID5BQ14865 1188 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 Q3C1V9 767 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 TTBK2Q6IQ55 1244 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 ELMOD1Q8N336 334 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 ICA1LQ8NDH6 482 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 DSCC1Q9BVC3 393 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 ARMCX3Q9UH62 379 aaPredicted RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 A0A087WWV3 80 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 GLE1Q53GS7 698 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 TOGARAM2Q6ZUX3 1019 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 GSPT2Q8IYD1 628 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 SYMPKQ92797 1274 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 NUDCD1Q96RS6 583 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 NT5C3AQ9H0P0 336 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PANK4Q9NVE7 773 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PPP2R2AP63151 447 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PTH1RQ03431 593 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 RAPH1Q70E73 1250 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 FASTKD5Q7L8L6 764 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 UPF3AQ9H1J1 476 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 SLITRK6Q9H5Y7 841 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 NDE1Q9NXR1 346 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 G3BP2Q9UN86 482 aaKnown RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 TRAF3IP3Q9Y228 551 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 PCDHA5Q9Y5H7 936 aa11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
SLC6A4-201ENST00000261707 DPYSL4O14531 572 aa11.62□□□□□ -0.55
SLC6A4-201ENST00000261707 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
SLC6A4-201ENST00000261707 MTHFSDQ2M296 383 aaKnown RBP11.62□□□□□ -0.55
SLC6A4-201ENST00000261707 G2E3Q7L622 706 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms