RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FAM133BQ5BKY9 247 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 TTI2Q6NXR4 508 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 NBPF10Q6P3W6 841 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 KRT23Q9C075 422 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 NAPBQ9H115 298 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ISCUQ9H1K1 167 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 NDST4Q9H3R1 872 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 CWC25Q9NXE8 425 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SLC12A4Q9UP95 1085 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 LAMB4A4D0S4 1761 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 NID2Q14112 1375 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SHANK3Q9BYB0 1731 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 GRID2IPA4D2P6 1211 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 CTNND1O60716 968 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 PRDM1O75626 825 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SNRPA1P09661 255 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 HNRNPH3P31942 346 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ESCO1Q5FWF5 840 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 MFSD6Q6ZSS7 791 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 FAM114A1Q8IWE2 563 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 RNF10Q8N5U6 811 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 LPIN2Q92539 896 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SHISA4Q96DD7 197 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ERGIC2Q96RQ1 377 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 PHF20Q9BVI0 1012 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 FAM207AQ9NSI2 230 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ARFGEF2Q9Y6D5 1785 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ZNF532Q9HCE3 1301 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 DCDC2CA8MYV0 355 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 PJA2O43164 708 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 FTCDO95954 541 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 RPS6KA3P51812 740 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ERVK-9P63128 1117 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 CCDC57Q2TAC2 916 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 KRT71Q3SY84 523 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 AKNAD1Q5T1N1 836 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 ZNF654Q8IZM8 581 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 MDM1Q8TC05 714 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 XPO6Q96QU8 1125 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 PSMD1Q99460 953 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 DUSP9Q99956 384 aaKnown RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 RNF26Q9BY78 433 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-201ENST00000261443 IRAK4Q9NWZ3 460 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 C1orf167Q5SNV9 1468 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 TJP1Q07157 1748 aa7.95□□□□□ -1.14
CSDE1-201ENST00000261443 KIF1AQ12756 1690 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 LIN7AO14910 233 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 PALMO75781 387 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MCM7P33993 719 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 PRPHP41219 470 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 SLC1A4P43007 532 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MCAMP43121 646 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 RAB27AP51159 221 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 GFPT1Q06210 699 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MTMR3Q13615 1198 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 CUL1Q13616 776 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 BLMHQ13867 455 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 ZNF268Q14587 947 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MIIPQ5JXC2 388 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 RRAGAQ7L523 313 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 DDX42Q86XP3 938 aaKnown RBP eCLIP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 TMTC2Q8N394 836 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 IQCDQ96DY2 449 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MMRN2Q9H8L6 949 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 CNOT10Q9H9A5 744 aaKnown RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 FBXL5Q9UKA1 691 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 DISP2A7MBM2 1401 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 MYH7BA7E2Y1 1941 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 NEFHP12036 1026 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 IL17AQ16552 155 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 ERMARDQ5T6L9 678 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 SLC30A9Q6PML9 568 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 ANKLE2Q86XL3 938 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 EIF1ADQ8N9N8 165 aaKnown RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 DDX17Q92841 729 aaKnown RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 ITFG2Q969R8 447 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 FAM167BQ9BTA0 163 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 FAM129AQ9BZQ8 928 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 SLC52A2Q9HAB3 445 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 SAMD15Q9P1V8 674 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 PACSIN2Q9UNF0 486 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-201ENST00000261443 TACC3Q9Y6A5 838 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 SLC4A4Q9Y6R1 1079 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 ABCC12Q96J65 1359 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 NUP188Q5SRE5 1749 aa7.94□□□□□ -1.14
CSDE1-201ENST00000261443 BICDL2A1A5D9 508 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 EPHB6O15197 1021 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 AHCYL1O43865 530 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 LUC7L3O95232 432 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 FESP07332 822 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 LINGO3P0C6S8 592 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CCND1P24385 295 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ECHS1P30084 290 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 EHHADHQ08426 723 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ITIH4Q14624 930 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 UBE3CQ15386 1083 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms