RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PCDHA12Q9UN75 941 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 POTEMA6NI47 508 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 WDR46O15213 610 aaKnown RBP31.06■■■□□ 2.56
CCM2-201ENST00000258781 RHOBTB3O94955 611 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 Q4G0T1 1027 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 LRRC8AQ8IWT6 810 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 SLFN12Q8IYM2 578 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.06■■■□□ 2.56
CCM2-201ENST00000258781 RWDD2AQ9UIY3 292 aa31.06■■■□□ 2.56
CCM2-201ENST00000258781 TBX3O15119 743 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 IREB2P48200 963 aaKnown RBP31.05■■■□□ 2.56
CCM2-201ENST00000258781 BACE1P56817 501 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 KMT5BQ4FZB7 885 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 TMEM119Q4V9L6 283 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 TMC6Q7Z403 805 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 SNX29Q8TEQ0 813 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 CCDC47Q96A33 483 aaKnown RBP31.05■■■□□ 2.56
CCM2-201ENST00000258781 TRIM9Q9C026 710 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 SPTLC3Q9NUV7 552 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 MRPL11Q9Y3B7 192 aaKnown RBP31.05■■■□□ 2.56
CCM2-201ENST00000258781 PARP14Q460N5 1801 aa31.05■■■□□ 2.56
CCM2-201ENST00000258781 OFD1O75665 1012 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 CDK11BP21127 795 aaKnown RBP31.04■■■□□ 2.56
CCM2-201ENST00000258781 CIITAP33076 1130 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 LRMPQ12912 555 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 CCDC174Q6PII3 467 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 CNKSR2Q8WXI2 1034 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 FBXO28Q9NVF7 368 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 CTNND2Q9UQB3 1225 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 ABCB11O95342 1321 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 CYP3A4P08684 503 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 TAL1P17542 331 aaPredicted RBP31.04■■■□□ 2.56
CCM2-201ENST00000258781 CLMNQ96JQ2 1002 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 SAMSN1Q9NSI8 373 aaKnown RBP31.04■■■□□ 2.56
CCM2-201ENST00000258781 BLOC1S4Q9NUP1 217 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 AFG3L2Q9Y4W6 797 aa31.04■■■□□ 2.56
CCM2-201ENST00000258781 VCAM1P19320 739 aa31.03■■■□□ 2.56
CCM2-201ENST00000258781 PAK1Q13153 545 aa31.03■■■□□ 2.56
CCM2-201ENST00000258781 TTLL12Q14166 644 aaPredicted RBP31.03■■■□□ 2.56
CCM2-201ENST00000258781 NOLC1Q14978 699 aaKnown RBP eCLIP31.03■■■□□ 2.56
CCM2-201ENST00000258781 CDKAL1Q5VV42 579 aa31.03■■■□□ 2.56
CCM2-201ENST00000258781 PDZRN4Q6ZMN7 1036 aaPredicted RBP31.03■■■□□ 2.56
CCM2-201ENST00000258781 SV2BQ7L1I2 683 aa31.03■■■□□ 2.56
CCM2-201ENST00000258781 CSADQ9Y600 493 aa31.03■■■□□ 2.56
CCM2-201ENST00000258781 KDM3AQ9Y4C1 1321 aa31.02■■■□□ 2.56
CCM2-201ENST00000258781 HYIQ5T013 277 aa31.02■■■□□ 2.56
CCM2-201ENST00000258781 LDHDQ86WU2 507 aa31.02■■■□□ 2.56
CCM2-201ENST00000258781 CCDC150Q8NCX0 1101 aa31.02■■■□□ 2.56
CCM2-201ENST00000258781 NAP1L5Q96NT1 182 aaPredicted RBP31.02■■■□□ 2.56
CCM2-201ENST00000258781 HOXA13P31271 388 aaPredicted RBP31.01■■■□□ 2.56
CCM2-201ENST00000258781 USP14P54578 494 aa31.01■■■□□ 2.56
CCM2-201ENST00000258781 HMGCS2P54868 508 aa31.01■■■□□ 2.56
CCM2-201ENST00000258781 STX17P56962 302 aa31.01■■■□□ 2.56
CCM2-201ENST00000258781 VSTM4Q8IW00 320 aa31.01■■■□□ 2.56
CCM2-201ENST00000258781 GIMAP8Q8ND71 665 aaPredicted RBP31.01■■■□□ 2.56
CCM2-201ENST00000258781 ETNPPLQ8TBG4 499 aa31.01■■■□□ 2.56
CCM2-201ENST00000258781 LARP4BQ92615 738 aaKnown RBP31.01■■■□□ 2.56
CCM2-201ENST00000258781 GCOM1H8Y6P7 765 aaPredicted RBP31.01■■■□□ 2.55
CCM2-201ENST00000258781 POLR2MP0CAP2 368 aa31.01■■■□□ 2.55
CCM2-201ENST00000258781 ADSSL1Q8N142 457 aa31.01■■■□□ 2.55
CCM2-201ENST00000258781 RAD54LQ92698 747 aa31.01■■■□□ 2.55
CCM2-201ENST00000258781 LRRC27Q9C0I9 530 aa31.01■■■□□ 2.55
CCM2-201ENST00000258781 GDAQ9Y2T3 454 aa31.01■■■□□ 2.55
CCM2-201ENST00000258781 PRCPP42785 496 aa31■■■□□ 2.55
CCM2-201ENST00000258781 ANKRD13AQ8IZ07 590 aa31■■■□□ 2.55
CCM2-201ENST00000258781 NELFBQ8WX92 580 aa31■■■□□ 2.55
CCM2-201ENST00000258781 ZNF408Q9H9D4 720 aa31■■■□□ 2.55
CCM2-201ENST00000258781 ELP3Q9H9T3 547 aa31■■■□□ 2.55
CCM2-201ENST00000258781 ASIC1P78348 528 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 STIM1Q13586 685 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 LENG9Q96B70 501 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 FAM20AQ96MK3 541 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 NUDT12Q9BQG2 462 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 SLF1Q9BQI6 1058 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 NT5C3AQ9H0P0 336 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 INTS13Q9NVM9 706 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 PRR16Q569H4 304 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 CNNM4Q6P4Q7 775 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 PRPF38AQ8NAV1 312 aaKnown RBP30.99■■■□□ 2.55
CCM2-201ENST00000258781 EHMT1Q9H9B1 1298 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 EXOC1Q9NV70 894 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 RLFQ13129 1914 aa30.99■■■□□ 2.55
CCM2-201ENST00000258781 CFBP00751 764 aa30.98■■■□□ 2.55
CCM2-201ENST00000258781 ICAM1P05362 532 aa30.98■■■□□ 2.55
CCM2-201ENST00000258781 PPP1R2P41236 205 aa30.98■■■□□ 2.55
CCM2-201ENST00000258781 ARID5BQ14865 1188 aa30.98■■■□□ 2.55
CCM2-201ENST00000258781 HSP90AA4PQ58FG1 418 aa30.98■■■□□ 2.55
CCM2-201ENST00000258781 SAMD1Q6SPF0 538 aaPredicted RBP30.98■■■□□ 2.55
CCM2-201ENST00000258781 MCM6Q14566 821 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 TPD52L1Q16890 204 aaPredicted RBP30.97■■■□□ 2.55
CCM2-201ENST00000258781 GJA10Q969M2 543 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 C12orf42Q96LP6 360 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 RPAP3Q9H6T3 665 aaPredicted RBP30.97■■■□□ 2.55
CCM2-201ENST00000258781 FAM86B1E9PN63 330 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 FAM86B2P0C5J1 330 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 CTAGE1Q96RT6 745 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 TANGO6Q9C0B7 1094 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 STK24Q9Y6E0 443 aa30.97■■■□□ 2.55
CCM2-201ENST00000258781 A0A1B0GTH6 734 aa30.96■■■□□ 2.55
CCM2-201ENST00000258781 PVALEFA0A1B0GWK0 134 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms