RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 LPIN2Q92539 896 aa13.54□□□□□ -0.24
USP30-201ENST00000257548 BIN2Q9UBW5 565 aaPredicted RBP13.54□□□□□ -0.24
USP30-201ENST00000257548 DIAPH2O60879 1101 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 UPP2O95045 317 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 CCDC24Q8N4L8 307 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
USP30-201ENST00000257548 PDHA1P08559 390 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 GNAT2P19087 354 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 ERFP50548 548 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 ATP11AP98196 1134 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 SEC16BQ96JE7 1060 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 EPB41L4AQ9HCS5 686 aaPredicted RBP13.53□□□□□ -0.24
USP30-201ENST00000257548 TPX2Q9ULW0 747 aaKnown RBP13.53□□□□□ -0.24
USP30-201ENST00000257548 CPDO75976 1380 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 RAD51CO43502 376 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 FAM107AO95990 144 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 MMEP08473 750 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 CCNE1P24864 410 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 HAUS3Q68CZ6 603 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 ENAHQ8N8S7 591 aaPredicted RBP13.53□□□□□ -0.24
USP30-201ENST00000257548 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 U2AF1L4Q8WU68 220 aaKnown RBP13.53□□□□□ -0.24
USP30-201ENST00000257548 PTPN22Q9Y2R2 807 aa13.53□□□□□ -0.24
USP30-201ENST00000257548 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 SLIT1O75093 1534 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 SGSM3Q96HU1 749 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 RBM28Q9NW13 759 aaKnown RBP13.52□□□□□ -0.24
USP30-201ENST00000257548 SERPINA10Q9UK55 444 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 TMEM94Q12767 1356 aa13.52□□□□□ -0.24
USP30-201ENST00000257548 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 CALM1P0DP23 149 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 CALM2P0DP24 149 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 CALM3P0DP25 149 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 COPB2P35606 906 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 TFAP4Q01664 338 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 GRIPAP1Q4V328 841 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 CREG2Q8IUH2 290 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 RAB34Q9BZG1 259 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 ACTR5Q9H9F9 607 aaPredicted RBP13.52□□□□□ -0.25
USP30-201ENST00000257548 ITIH6Q6UXX5 1313 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 SMIM24O75264 130 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 IFI16Q16666 785 aaKnown RBP13.52□□□□□ -0.25
USP30-201ENST00000257548 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
USP30-201ENST00000257548 WDR59Q6PJI9 974 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 KIF9Q9HAQ2 790 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 TBK1Q9UHD2 729 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 SAP30BPQ9UHR5 308 aaKnown RBP13.52□□□□□ -0.25
USP30-201ENST00000257548 PNMA2Q9UL42 364 aa13.52□□□□□ -0.25
USP30-201ENST00000257548 UTYO14607 1347 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 PLS1Q14651 629 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 ADSSL1Q8N142 457 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 CELF4Q9BZC1 486 aaKnown RBP13.51□□□□□ -0.25
USP30-201ENST00000257548 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 ANKARQ7Z5J8 1434 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 GJC1P36383 396 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 CAPN12Q6ZSI9 719 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 AENQ8WTP8 325 aaKnown RBP13.51□□□□□ -0.25
USP30-201ENST00000257548 STAMBPL1Q96FJ0 436 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 CIAO1O76071 339 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 LONP1P36776 959 aaKnown RBP13.51□□□□□ -0.25
USP30-201ENST00000257548 PPP2R2AP63151 447 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 WHAMMQ8TF30 809 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 CASKIN2Q8WXE0 1202 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
USP30-201ENST00000257548 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 GCFC2P16383 781 aaKnown RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 SMTNP53814 917 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 NUGGCQ68CJ6 796 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 TFCP2L1Q9NZI6 479 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 ARHGAP20Q9P2F6 1191 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 TSKSQ9UJT2 592 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 KLRC1P26715 233 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 MXRA7P84157 204 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
USP30-201ENST00000257548 TXNRD1Q16881 649 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 HOOK3Q86VS8 718 aa13.5□□□□□ -0.25
USP30-201ENST00000257548 CRNKL1Q9BZJ0 848 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms