RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SP3Q02447 781 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 SLC39A14Q15043 492 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 SHC4Q6S5L8 630 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 DPP9Q86TI2 863 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
NIP7-201ENST00000254940 TNFRSF25Q93038 417 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 RMDN3Q96TC7 470 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
NIP7-201ENST00000254940 M0R2N6 131 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 TDP2O95551 362 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 FDX1P10109 184 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 NPLOC4Q8TAT6 608 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
NIP7-201ENST00000254940 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
NIP7-201ENST00000254940 FOXN1O15353 648 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 EDIL3O43854 480 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 SLC25A27O95847 323 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 CDC25AP30304 524 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 MCM7P33993 719 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 PRAMEF19Q5SWL8 479 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 TMEM63BQ5T3F8 832 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 ARHGEF16Q5VV41 709 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 CCDC73Q6ZRK6 1079 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 DDX19AQ9NUU7 478 aaKnown RBP13.72□□□□□ -0.21
NIP7-201ENST00000254940 BIN1O00499 593 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 CCDC192P0DO97 292 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 PFKFB1P16118 471 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
NIP7-201ENST00000254940 HSD17B4P51659 736 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 PRKCZQ05513 592 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 MROH8Q9H579 483 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 FLRT1Q9NZU1 646 aa13.72□□□□□ -0.21
NIP7-201ENST00000254940 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
NIP7-201ENST00000254940 YEATS4O95619 227 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 ELNP15502 786 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 PTPREP23469 700 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
NIP7-201ENST00000254940 C11orf57Q6ZUT1 292 aaPredicted RBP13.71□□□□□ -0.21
NIP7-201ENST00000254940 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.21
NIP7-201ENST00000254940 FGD4Q96M96 766 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
NIP7-201ENST00000254940 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.21
NIP7-201ENST00000254940 ESYT2A0FGR8 921 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 hCG_1984214I3L0E3 225 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 CCNT1O60563 726 aaKnown RBP13.71□□□□□ -0.22
NIP7-201ENST00000254940 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 TRIM32Q13049 653 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 NONOQ15233 471 aaKnown RBP eCLIP13.71□□□□□ -0.22
NIP7-201ENST00000254940 IL17AQ16552 155 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 ATL3Q6DD88 541 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 GRAMD1CQ8IYS0 662 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 ZNF713Q8N859 430 aaPredicted RBP13.71□□□□□ -0.22
NIP7-201ENST00000254940 TRIM44Q96DX7 344 aaPredicted RBP13.71□□□□□ -0.22
NIP7-201ENST00000254940 SDF4Q9BRK5 362 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 PXMP2Q9NR77 195 aa13.71□□□□□ -0.22
NIP7-201ENST00000254940 THSD7BQ9C0I4 1608 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 SLC37A4O43826 429 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 KINO60870 393 aaKnown RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 ZNF202O95125 648 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 MAPK4P31152 587 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 ZNF76P36508 570 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 FLT3LGP49771 235 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 ARHGAP4P98171 946 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 FBXO16Q8IX29 292 aaPredicted RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 GTF3C2Q8WUA4 911 aaPredicted RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 FOXP1Q9H334 677 aaPredicted RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 A0A087X0B3 334 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 CYP2C19P33261 490 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 LBX1P52954 281 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 FCGRTP55899 365 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 PGM5Q15124 567 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 TKFCQ3LXA3 575 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 PRR16Q569H4 304 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 RBM43Q6ZSC3 357 aaKnown RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 SEPT14Q6ZU15 432 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 ZNF830Q96NB3 372 aaPredicted RBP13.7□□□□□ -0.22
NIP7-201ENST00000254940 CBX8Q9HC52 389 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 FBXO40Q9UH90 709 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
NIP7-201ENST00000254940 FAM86B1E9PN63 330 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 FAM86B2P0C5J1 330 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 CASP1P29466 404 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 SP4Q02446 784 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 GJC2Q5T442 439 aaPredicted RBP13.69□□□□□ -0.22
NIP7-201ENST00000254940 PDILTQ8N807 584 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
NIP7-201ENST00000254940 LENG1Q96BZ8 264 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms