RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 NTRK3Q16288 839 aa28.85■■■□□ 2.21
LSM7-201ENST00000252622 TRIM60Q495X7 471 aa28.85■■■□□ 2.21
LSM7-201ENST00000252622 TYW1BQ6NUM6 668 aa28.85■■■□□ 2.21
LSM7-201ENST00000252622 BARHL2Q9NY43 387 aa28.85■■■□□ 2.21
LSM7-201ENST00000252622 PRPF3O43395 683 aaKnown RBP28.84■■■□□ 2.21
LSM7-201ENST00000252622 IFNAR1P17181 557 aa28.84■■■□□ 2.21
LSM7-201ENST00000252622 PFKFB3Q16875 520 aaPredicted RBP28.84■■■□□ 2.21
LSM7-201ENST00000252622 ZMYND8Q9ULU4 1186 aaPredicted RBP28.84■■■□□ 2.21
LSM7-201ENST00000252622 STAM2O75886 525 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 RGS20O76081 388 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 SCG2P13521 617 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 CCT2P78371 535 aaKnown RBP28.83■■■□□ 2.21
LSM7-201ENST00000252622 KCNV1Q6PIU1 500 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 COPS5Q92905 334 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 RNF26Q9BY78 433 aaPredicted RBP28.83■■■□□ 2.21
LSM7-201ENST00000252622 DDX41Q9UJV9 622 aaKnown RBP28.83■■■□□ 2.21
LSM7-201ENST00000252622 MRVI1Q9Y6F6 885 aa28.83■■■□□ 2.21
LSM7-201ENST00000252622 GH1P01241 217 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 BRDTQ58F21 947 aaPredicted RBP28.82■■■□□ 2.2
LSM7-201ENST00000252622 XRRA1Q6P2D8 792 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 CXCL17Q6UXB2 119 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 GLT8D2Q9H1C3 349 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 NCOA5Q9HCD5 579 aaKnown RBP28.82■■■□□ 2.2
LSM7-201ENST00000252622 RIC8AQ9NPQ8 531 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 DNAH12Q6ZR08 3092 aa28.82■■■□□ 2.2
LSM7-201ENST00000252622 A0A0U1RQG5 324 aaPredicted RBP28.81■■■□□ 2.2
LSM7-201ENST00000252622 A6NJR5 290 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 UBE2SQ16763 222 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 LY6KQ17RY6 165 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 PCNX4Q63HM2 1172 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 PHKBQ93100 1093 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 POLR3EQ9NVU0 708 aa28.81■■■□□ 2.2
LSM7-201ENST00000252622 SPDYE3A6NKU9 549 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 SYN1P17600 705 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 ADCY7P51828 1080 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 MRPS9P82933 396 aaKnown RBP28.8■■■□□ 2.2
LSM7-201ENST00000252622 AKAP17AQ02040 695 aaKnown RBP28.8■■■□□ 2.2
LSM7-201ENST00000252622 TLE2Q04725 743 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 ARHGAP1Q07960 439 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 ANKRD1Q15327 319 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 PKN1Q16512 942 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 ANKRD33Q7Z3H0 272 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 EMID1Q96A84 441 aaPredicted RBP28.8■■■□□ 2.2
LSM7-201ENST00000252622 TOX2Q96NM4 488 aa28.8■■■□□ 2.2
LSM7-201ENST00000252622 INPP4AQ96PE3 977 aaPredicted RBP28.8■■■□□ 2.2
LSM7-201ENST00000252622 LARP6Q9BRS8 491 aaKnown RBP28.8■■■□□ 2.2
LSM7-201ENST00000252622 MROH7Q68CQ1 1323 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 TGFB3P10600 412 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 GNPTABQ3T906 1256 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 CCDC12Q8WUD4 166 aaPredicted RBP28.79■■■□□ 2.2
LSM7-201ENST00000252622 VTI1AQ96AJ9 217 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 SLC26A6Q9BXS9 759 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 SEZ6LQ9BYH1 1024 aa28.79■■■□□ 2.2
LSM7-201ENST00000252622 ESYT2A0FGR8 921 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 SMCO2A6NFE2 343 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 ARVCFO00192 962 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 KPNA6O60684 536 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 CDK7P50613 346 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 PURAQ00577 322 aaKnown RBP28.78■■■□□ 2.2
LSM7-201ENST00000252622 CHRDL2Q6WN34 429 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 SLC43A3Q8NBI5 491 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 EHMT1Q9H9B1 1298 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 PDLIM7Q9NR12 457 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 PRKAG2Q9UGJ0 569 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 PCDHA6Q9UN73 950 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 PCDHA8Q9Y5H6 950 aa28.78■■■□□ 2.2
LSM7-201ENST00000252622 CPLX1O14810 134 aa28.77■■■□□ 2.2
LSM7-201ENST00000252622 PQBP1O60828 265 aaKnown RBP28.77■■■□□ 2.2
LSM7-201ENST00000252622 ICAM3P32942 547 aa28.77■■■□□ 2.2
LSM7-201ENST00000252622 AK2P54819 239 aa28.77■■■□□ 2.2
LSM7-201ENST00000252622 PRO3102Q9H379 93 aa28.77■■■□□ 2.2
LSM7-201ENST00000252622 FOSP01100 380 aaPredicted RBP28.76■■■□□ 2.19
LSM7-201ENST00000252622 MYL3P08590 195 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 CLTBP09497 229 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 STK3Q13188 491 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 LAMC2Q13753 1193 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 CPLX2Q6PUV4 134 aaKnown RBP28.76■■■□□ 2.19
LSM7-201ENST00000252622 TRIM22Q8IYM9 498 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 AFG1LQ8WV93 481 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 ZFP91Q96JP5 570 aaPredicted RBP28.76■■■□□ 2.19
LSM7-201ENST00000252622 GDF15Q99988 308 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 MTG1Q9BT17 334 aaPredicted RBP28.76■■■□□ 2.19
LSM7-201ENST00000252622 TPCN1Q9ULQ1 816 aa28.76■■■□□ 2.19
LSM7-201ENST00000252622 COLQQ9Y215 455 aaPredicted RBP28.76■■■□□ 2.19
LSM7-201ENST00000252622 DCDC2CA8MYV0 355 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 FIBPO43427 364 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 SLC34A2O95436 690 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 MMP3P08254 477 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 UBA1P22314 1058 aaKnown RBP28.75■■■□□ 2.19
LSM7-201ENST00000252622 AP3B2Q13367 1082 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 ITGA7Q13683 1181 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 ZMYND12Q9H0C1 365 aa28.75■■■□□ 2.19
LSM7-201ENST00000252622 GRIN2DO15399 1336 aa28.74■■■□□ 2.19
LSM7-201ENST00000252622 SPATA31C2B4DYI2 1134 aa28.74■■■□□ 2.19
LSM7-201ENST00000252622 PFKFB2O60825 505 aa28.74■■■□□ 2.19
LSM7-201ENST00000252622 MAGEA10P43363 369 aaPredicted RBP28.74■■■□□ 2.19
LSM7-201ENST00000252622 CLK2P49760 499 aaKnown RBP28.74■■■□□ 2.19
LSM7-201ENST00000252622 SSRP1Q08945 709 aaKnown RBP28.74■■■□□ 2.19
LSM7-201ENST00000252622 CELF3Q5SZQ8 465 aaKnown RBP28.74■■■□□ 2.19
LSM7-201ENST00000252622 DHX37Q8IY37 1157 aaKnown RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms