RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 TNFRSF25Q93038 417 aa26.01■■□□□ 1.75
APOE-201ENST00000252486 ZNF333Q96JL9 665 aa26.01■■□□□ 1.75
APOE-201ENST00000252486 ZNF865P0CJ78 1059 aaPredicted RBP26■■□□□ 1.75
APOE-201ENST00000252486 NR5A1Q13285 461 aa26■■□□□ 1.75
APOE-201ENST00000252486 COL13A1Q5TAT6 717 aaPredicted RBP26■■□□□ 1.75
APOE-201ENST00000252486 KCNV1Q6PIU1 500 aa26■■□□□ 1.75
APOE-201ENST00000252486 NLRX1Q86UT6 975 aa26■■□□□ 1.75
APOE-201ENST00000252486 FBXO16Q8IX29 292 aaPredicted RBP26■■□□□ 1.75
APOE-201ENST00000252486 TBCKQ8TEA7 893 aa26■■□□□ 1.75
APOE-201ENST00000252486 FAM184BQ9ULE4 1060 aa26■■□□□ 1.75
APOE-201ENST00000252486 RBM47A0AV96 593 aaKnown RBP25.99■■□□□ 1.75
APOE-201ENST00000252486 SEPT4O43236 478 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 MSCO60682 206 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 AKR1A1P14550 325 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 SYT1P21579 422 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 ZNF76P36508 570 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 MRPS9P82933 396 aaKnown RBP25.99■■□□□ 1.75
APOE-201ENST00000252486 PRAMEF19Q5SWL8 479 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 IQSEC1Q6DN90 963 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 EEPD1Q7L9B9 569 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 SCFD2Q8WU76 684 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 CRYGNQ8WXF5 182 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 CDHR1Q96JP9 859 aa25.99■■□□□ 1.75
APOE-201ENST00000252486 INPP4AQ96PE3 977 aaPredicted RBP25.99■■□□□ 1.75
APOE-201ENST00000252486 NAP1L4Q99733 375 aaKnown RBP25.99■■□□□ 1.75
APOE-201ENST00000252486 U2AF2P26368 475 aaKnown RBP eCLIP25.98■■□□□ 1.75
APOE-201ENST00000252486 CNGA1P29973 690 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 TAPT1Q6NXT6 567 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 PIK3AP1Q6ZUJ8 805 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 NIPA1Q7RTP0 329 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 TRPV1Q8NER1 839 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.98■■□□□ 1.755e-7■■■■■ 39.7
APOE-201ENST00000252486 TSHZ2Q9NRE2 1034 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 DAXXQ9UER7 740 aaPredicted RBP25.98■■□□□ 1.75
APOE-201ENST00000252486 UBIAD1Q9Y5Z9 338 aa25.98■■□□□ 1.75
APOE-201ENST00000252486 DDX49Q9Y6V7 483 aaKnown RBP25.98■■□□□ 1.75
APOE-201ENST00000252486 TGFB3P10600 412 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 CIITAP33076 1130 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 TTLL4Q14679 1199 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 MCTP1Q6DN14 999 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 MOXD1Q6UVY6 613 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 NEK8Q86SG6 692 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 NOSTRINQ8IVI9 506 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 SPRYD3Q8NCJ5 442 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 GPRASP2Q96D09 838 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 JADE2Q9NQC1 790 aa25.97■■□□□ 1.75
APOE-201ENST00000252486 VPS37CA5D8V6 355 aaPredicted RBP25.96■■□□□ 1.75
APOE-201ENST00000252486 MAFGO15525 162 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 FIBPO43427 364 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 CCL5P13501 91 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 CCND3P30281 292 aaPredicted RBP25.96■■□□□ 1.75
APOE-201ENST00000252486 INF2Q27J81 1249 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 CCDC144BQ3MJ40 725 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 CEP55Q53EZ4 464 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 MXRA8Q9BRK3 442 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 MYH7BA7E2Y1 1941 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 KIAA1217Q5T5P2 1943 aa25.96■■□□□ 1.75
APOE-201ENST00000252486 NKRFO15226 690 aaKnown RBP eCLIP25.95■■□□□ 1.74
APOE-201ENST00000252486 STX6O43752 255 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 GCFC2P16383 781 aaKnown RBP25.95■■□□□ 1.74
APOE-201ENST00000252486 ICAM3P32942 547 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 TNFAIP2Q03169 654 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 SEPT14Q6ZU15 432 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 WDR11Q9BZH6 1224 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 RNF208Q9H0X6 261 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 UNC93B1Q9H1C4 597 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 PAK6Q9NQU5 681 aaPredicted RBP25.95■■□□□ 1.74
APOE-201ENST00000252486 RTEL1Q9NZ71 1219 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 DDX20Q9UHI6 824 aaKnown RBP25.95■■□□□ 1.74
APOE-201ENST00000252486 RBM19Q9Y4C8 960 aaKnown RBP25.95■■□□□ 1.74
APOE-201ENST00000252486 MRVI1Q9Y6F6 885 aa25.95■■□□□ 1.74
APOE-201ENST00000252486 MEIS1O00470 390 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 RGS20O76081 388 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 CAPN2P17655 700 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 ITGB5P18084 799 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 SETQ01105 290 aaPredicted RBP25.94■■□□□ 1.74
APOE-201ENST00000252486 MTFR1Q15390 333 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 PDGFCQ9NRA1 345 aa25.94■■□□□ 1.74
APOE-201ENST00000252486 NOL7Q9UMY1 257 aaKnown RBP25.94■■□□□ 1.74
APOE-201ENST00000252486 CYP3A7-CYP3A51PA0A087WV96 503 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 RARBP10826 455 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 CYP3A7P24462 503 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 ADCYAP1R1P41586 468 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 TRAPPC10P48553 1259 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 MTMR1Q13613 665 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 DUSP28Q4G0W2 176 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 EARS2Q5JPH6 523 aaKnown RBP25.93■■□□□ 1.74
APOE-201ENST00000252486 PPP4R3AQ6IN85 833 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 Q9Y3F1 56 aa25.93■■□□□ 1.74
APOE-201ENST00000252486 SPATA31C2B4DYI2 1134 aa25.92■■□□□ 1.74
APOE-201ENST00000252486 DUSP11O75319 330 aaKnown RBP25.92■■□□□ 1.74
APOE-201ENST00000252486 TXNP10599 105 aaKnown RBP25.92■■□□□ 1.74
APOE-201ENST00000252486 LETM2Q2VYF4 491 aa25.92■■□□□ 1.74
APOE-201ENST00000252486 CCDC62Q6P9F0 684 aa25.92■■□□□ 1.74
APOE-201ENST00000252486 BRAPQ7Z569 592 aa25.92■■□□□ 1.74
APOE-201ENST00000252486 ZFP91Q96JP5 570 aaPredicted RBP25.92■■□□□ 1.74
APOE-201ENST00000252486 MTMR6Q9Y217 621 aa25.92■■□□□ 1.74
APOE-201ENST00000252486 KIF28PB7ZC32 967 aa25.91■■□□□ 1.74
APOE-201ENST00000252486 FAM86B1E9PN63 330 aa25.91■■□□□ 1.74
APOE-201ENST00000252486 GJB1P08034 283 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms