RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 CUL5Q93034 780 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
CNN1-201ENST00000252456 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
CNN1-201ENST00000252456 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 MOXD2PA6NHM9 499 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 ADAMTS3O15072 1205 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 EVI5O60447 810 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 PFKFB2O60825 505 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 LARGE1O95461 756 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 ASGR1P07306 291 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 TXNP10599 105 aaKnown RBP16.36■□□□□ 0.21
CNN1-201ENST00000252456 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
CNN1-201ENST00000252456 NEK4P51957 841 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 SLC39A5Q6ZMH5 540 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
CNN1-201ENST00000252456 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
CNN1-201ENST00000252456 H0YGN5 161 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 CCND2P30279 289 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 PCSK9Q8NBP7 692 aaKnown RBP16.35■□□□□ 0.21
CNN1-201ENST00000252456 INPP4AQ96PE3 977 aaPredicted RBP16.35■□□□□ 0.21
CNN1-201ENST00000252456 C22orf23Q9BZE7 217 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 DDX41Q9UJV9 622 aaKnown RBP16.35■□□□□ 0.21
CNN1-201ENST00000252456 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
CNN1-201ENST00000252456 ESYT2A0FGR8 921 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 SMCO2A6NFE2 343 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 NKRFO15226 690 aaKnown RBP eCLIP16.34■□□□□ 0.21
CNN1-201ENST00000252456 CLK2P49760 499 aaKnown RBP16.34■□□□□ 0.21
CNN1-201ENST00000252456 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 ANKRD1Q15327 319 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 ME3Q16798 604 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 PCNX4Q63HM2 1172 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 C7orf61Q8IZ16 206 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 PCDH10Q9P2E7 1040 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 ADCY7P51828 1080 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 RTP1P59025 263 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 SP2Q02086 613 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 PCDHA6Q9UN73 950 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 PCDHA8Q9Y5H6 950 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 LTBP2Q14767 1821 aa16.34■□□□□ 0.21
CNN1-201ENST00000252456 A6NJR5 290 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 CPLX1O14810 134 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 DTNBO60941 627 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 CTDNEP1O95476 244 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 SEMA3FQ13275 785 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 TRIM60Q495X7 471 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 PGBD1Q96JS3 809 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 SLKQ9H2G2 1235 aaPredicted RBP16.33■□□□□ 0.2
CNN1-201ENST00000252456 STARD7Q9NQZ5 370 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 TMEM260Q9NX78 707 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
CNN1-201ENST00000252456 ELP1O95163 1332 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 SPDYE3A6NKU9 549 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 STAM2O75886 525 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 AKAP17AQ02040 695 aaKnown RBP16.32■□□□□ 0.2
CNN1-201ENST00000252456 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 EMID1Q96A84 441 aaPredicted RBP16.32■□□□□ 0.2
CNN1-201ENST00000252456 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 AIFM3Q96NN9 605 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 RTEL1Q9NZ71 1219 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 GRIN2DO15399 1336 aa16.32■□□□□ 0.2
CNN1-201ENST00000252456 DEXIO95424 95 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 GH1P01241 217 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
CNN1-201ENST00000252456 ICAM3P32942 547 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 CPT1AP50416 773 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 PURAQ00577 322 aaKnown RBP16.31■□□□□ 0.2
CNN1-201ENST00000252456 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
CNN1-201ENST00000252456 TRIM22Q8IYM9 498 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 ANO3Q9BYT9 981 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 BCAS3Q9H6U6 928 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 ATP11BQ9Y2G3 1177 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
CNN1-201ENST00000252456 SPATA31C2B4DYI2 1134 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 TGFB3P10600 412 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 ITGB5P18084 799 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 CDK7P50613 346 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 TLE2Q04725 743 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 MYSM1Q5VVJ2 828 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 SLC43A3Q8NBI5 491 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
CNN1-201ENST00000252456 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 CRYGNQ8WXF5 182 aa16.3■□□□□ 0.2
CNN1-201ENST00000252456 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms