RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 AKT1S1Q96B36 256 aa21.76■■□□□ 1.07
CDC42EP1-201ENST00000249014 UIMC1Q96RL1 719 aa21.76■■□□□ 1.07
CDC42EP1-201ENST00000249014 NHEJ1Q9H9Q4 299 aaPredicted RBP21.76■■□□□ 1.07
CDC42EP1-201ENST00000249014 LRRC41Q15345 812 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 FIGNQ5HY92 759 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 FAM198AQ9UFP1 575 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZNF646O15015 1829 aaPredicted RBP21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 TERF2Q15554 542 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 VWA3BQ502W6 1294 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 FKBP15Q5T1M5 1219 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 SH3BP5LQ7L8J4 393 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 DNAJC19Q96DA6 116 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 PCDHA12Q9UN75 941 aa21.75■■□□□ 1.07
CDC42EP1-201ENST00000249014 A0A1W2PQJ5 194 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 RCCD1A6NED2 376 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 GCFC2P16383 781 aaKnown RBP21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 CCDC122Q5T0U0 273 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZNF622Q969S3 477 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 MKL1Q969V6 931 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 NDST4Q9H3R1 872 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 ARFGAP3Q9NP61 516 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 MYO6Q9UM54 1294 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 SIK3Q9Y2K2 1263 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 GOLGB1Q14789 3259 aaKnown RBP21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 PSMD14O00487 310 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 EPHB6O15197 1021 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 ATP8B1O43520 1251 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 SLC1A4P43007 532 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 WHAMMP3Q1A5X7 153 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 LRRC55Q6ZSA7 311 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 TMX4Q9H1E5 349 aaPredicted RBP21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZNHIT6Q9NWK9 470 aaKnown RBP21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
CDC42EP1-201ENST00000249014 MARCH6O60337 910 aa21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 KRT83P78385 493 aa21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZNF662Q6ZS27 426 aa21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 PNKPQ96T60 521 aa21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 LACRTQ9GZZ8 138 aa21.73■■□□□ 1.07
CDC42EP1-201ENST00000249014 EIF3CLB5ME19 914 aaKnown RBP21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 ENC1O14682 589 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 CYLC1P35663 651 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 LRRC63Q05C16 580 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 COASYQ13057 564 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 PSMD2Q13200 908 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 CDC37Q16543 378 aaPredicted RBP21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 SLFN13Q68D06 897 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 NCAPH2Q6IBW4 605 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 EIF3CQ99613 913 aaKnown RBP21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 LRRC27Q9C0I9 530 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 NYAP2Q9P242 653 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 PI4KBQ9UBF8 816 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 CCDC151A5D8V7 595 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 ERCC3P19447 782 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.072e-6■■□□□ 12.9
CDC42EP1-201ENST00000249014 SEPT2Q15019 361 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 MAN2A1Q16706 1144 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 DACT2Q5SW24 774 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 HYIQ5T013 277 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 MSL1Q68DK7 614 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 KIAA1328Q86T90 577 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 CCDC170Q8IYT3 715 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 MSANTD4Q8NCY6 345 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 JAKMIP2Q96AA8 810 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 FUT8Q9BYC5 575 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 KANSL2Q9H9L4 492 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 HDAC6Q9UBN7 1215 aa21.72■■□□□ 1.07
CDC42EP1-201ENST00000249014 E9PMD0 336 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 PLEKP08567 350 aaPredicted RBP21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CDK17Q00537 523 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CYP27A1Q02318 531 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 TRAPPC11Q7Z392 1133 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 DCAF4Q8WV16 495 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 IDI2Q9BXS1 227 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 ANO3Q9BYT9 981 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 FAM207AQ9NSI2 230 aaPredicted RBP21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CTAGE15A4D2H0 777 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 ZNF263O14978 683 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 ATP1A1P05023 1023 aaKnown RBP21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CTAGE8P0CG41 777 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 BRD3Q15059 726 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 STRIP1Q5VSL9 837 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CTAGE6Q86UF2 777 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 CTAGE4Q8IX94 777 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 P2RX7Q99572 595 aaKnown RBP21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 MRIQ9BWK5 157 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 FGFBP2Q9BYJ0 223 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 UBXN6Q9BZV1 441 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 KCNMB3Q9NPA1 279 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 RAB21Q9UL25 225 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 ABCB11O95342 1321 aa21.71■■□□□ 1.07
CDC42EP1-201ENST00000249014 SLX4Q8IY92 1834 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 MEIS2O14770 477 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 SNAP25P60880 206 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 LONRF2Q1L5Z9 754 aa21.7■■□□□ 1.06
CDC42EP1-201ENST00000249014 ZCWPW2Q504Y3 356 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms