RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 KCNB2Q92953 911 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 MTG1Q9BT17 334 aaPredicted RBP18.74■□□□□ 0.59
CLPP-201ENST00000245816 MYL10Q9BUA6 226 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 LY9Q9HBG7 655 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 POLR3EQ9NVU0 708 aa18.74■□□□□ 0.59
CLPP-201ENST00000245816 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
CLPP-201ENST00000245816 MRPL11Q9Y3B7 192 aaKnown RBP18.74■□□□□ 0.59
CLPP-201ENST00000245816 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.73■□□□□ 0.59
CLPP-201ENST00000245816 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.73■□□□□ 0.59
CLPP-201ENST00000245816 NKRFO15226 690 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLPP-201ENST00000245816 DHX16O60231 1041 aaKnown RBP18.73■□□□□ 0.59
CLPP-201ENST00000245816 NR3C2P08235 984 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
CLPP-201ENST00000245816 DNAJB2P25686 324 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 GPNMBQ14956 572 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 CATIPQ7Z7H3 387 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 TMEM199Q8N511 208 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 HERVK_113Q902F9 699 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 PDCD2LQ9BRP1 358 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 PBX4Q9BYU1 374 aa18.73■□□□□ 0.59
CLPP-201ENST00000245816 PRC1O43663 620 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 DDAH1O94760 285 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 MMP3P08254 477 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 CPT1AP50416 773 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 SP2Q02086 613 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 TRAF1Q13077 416 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 HIC1Q14526 733 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 TTLL4Q14679 1199 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 MCF2L2Q86YR7 1114 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 NEK1Q96PY6 1258 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 IWS1Q96ST2 819 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 TELO2Q9Y4R8 837 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
CLPP-201ENST00000245816 STXBP2Q15833 593 aa18.71■□□□□ 0.59
CLPP-201ENST00000245816 OTOP2Q7RTS6 562 aa18.71■□□□□ 0.59
CLPP-201ENST00000245816 YBX2Q9Y2T7 364 aaKnown RBP18.71■□□□□ 0.59
CLPP-201ENST00000245816 TET1Q8NFU7 2136 aa18.71■□□□□ 0.59
CLPP-201ENST00000245816 GBF1Q92538 1859 aa18.71■□□□□ 0.59
CLPP-201ENST00000245816 SH2B2O14492 632 aaPredicted RBP18.7■□□□□ 0.58
CLPP-201ENST00000245816 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
CLPP-201ENST00000245816 EIF3JO75822 258 aaKnown RBP18.7■□□□□ 0.58
CLPP-201ENST00000245816 CALM1P0DP23 149 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 CALM2P0DP24 149 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 CALM3P0DP25 149 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 HSPA4P34932 840 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 PGM5Q15124 567 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 ARHGEF16Q5VV41 709 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 DHX32Q7L7V1 743 aaKnown RBP18.7■□□□□ 0.58
CLPP-201ENST00000245816 VSIG10LQ86VR7 867 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 SGMS1Q86VZ5 419 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 SAMD3Q8N6K7 520 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 DHX38Q92620 1227 aaKnown RBP18.7■□□□□ 0.58
CLPP-201ENST00000245816 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
CLPP-201ENST00000245816 SORBS3O60504 671 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 PLEKHA8P1O95397 391 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 GH1P01241 217 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 FGBP02675 491 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 KIF5BP33176 963 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 GNAQP50148 359 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
CLPP-201ENST00000245816 TCTN1Q2MV58 587 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 GDF6Q6KF10 455 aaPredicted RBP18.69■□□□□ 0.58
CLPP-201ENST00000245816 NFRKBQ6P4R8 1299 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 PSRC1Q6PGN9 363 aaPredicted RBP18.69■□□□□ 0.58
CLPP-201ENST00000245816 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
CLPP-201ENST00000245816 USP38Q8NB14 1042 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
CLPP-201ENST00000245816 REV3LO60673 3130 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 CCDC69A6NI79 296 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 DLL1O00548 723 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 MYOGP15173 224 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 RXRAP19793 462 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 RABGGTBP53611 331 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 MRPS9P82933 396 aaKnown RBP18.68■□□□□ 0.58
CLPP-201ENST00000245816 SEMA3FQ13275 785 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 RAB11FIP4Q86YS3 637 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 RASEFQ8IZ41 740 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 SRBD1Q8N5C6 995 aaKnown RBP18.68■□□□□ 0.58
CLPP-201ENST00000245816 WNT8BQ93098 351 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 EMID1Q96A84 441 aaPredicted RBP18.68■□□□□ 0.58
CLPP-201ENST00000245816 TIFAQ96CG3 184 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 MAP3K20Q9NYL2 800 aaKnown RBP18.68■□□□□ 0.58
CLPP-201ENST00000245816 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
CLPP-201ENST00000245816 TMEM265A0A087WTH1 108 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 HAS3O00219 553 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 MYCLP12524 364 aaPredicted RBP18.67■□□□□ 0.58
CLPP-201ENST00000245816 HOXD8P13378 290 aaPredicted RBP18.67■□□□□ 0.58
CLPP-201ENST00000245816 HSDL1Q3SXM5 330 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 FAM47CQ5HY64 1035 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 MYSM1Q5VVJ2 828 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms