RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PTPN14Q15678 1187 aa20.69■□□□□ 0.9
HOXC11-201ENST00000243082 PRR16Q569H4 304 aa20.69■□□□□ 0.9
HOXC11-201ENST00000243082 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
HOXC11-201ENST00000243082 HPS3Q969F9 1004 aa20.69■□□□□ 0.9
HOXC11-201ENST00000243082 DUSP9Q99956 384 aaKnown RBP20.69■□□□□ 0.9
HOXC11-201ENST00000243082 TBX3O15119 743 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 CCNE1P24864 410 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 RASSF7Q02833 373 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 CCDC174Q6PII3 467 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 DYMQ7RTS9 669 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 FAM160B2Q86V87 743 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 TBC1D5Q92609 795 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 PPP1R13BQ96KQ4 1090 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 VPS16Q9H269 839 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 THAP9Q9H5L6 903 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 TAB2Q9NYJ8 693 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 KDM3AQ9Y4C1 1321 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 N4BP3O15049 544 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 CYP3A4P08684 503 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 PPP1R2P41236 205 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 GMPSP49915 693 aaPredicted RBP20.68■□□□□ 0.9
HOXC11-201ENST00000243082 SPIRE1Q08AE8 756 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 TNFAIP1Q13829 316 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 TEX2Q8IWB9 1127 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 ANKRD20A12PQ8NF67 263 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 DDX12PQ92771 950 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 P2RX5Q93086 422 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 TRIM47Q96LD4 638 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 BAG1Q99933 345 aaPredicted RBP20.68■□□□□ 0.9
HOXC11-201ENST00000243082 SRRTQ9BXP5 876 aaKnown RBP20.68■□□□□ 0.9
HOXC11-201ENST00000243082 LRRC27Q9C0I9 530 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 NT5C3AQ9H0P0 336 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 FEM1BQ9UK73 627 aa20.68■□□□□ 0.9
HOXC11-201ENST00000243082 ITIH6Q6UXX5 1313 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 FZD9O00144 591 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 STAT3P40763 770 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 RBL2Q08999 1139 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 CEP135Q66GS9 1140 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 ANKRD40Q6AI12 368 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 MICALL2Q8IY33 904 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 SLC39A2Q9NP94 309 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 FBXO28Q9NVF7 368 aa20.67■□□□□ 0.9
HOXC11-201ENST00000243082 ASTN2O75129 1339 aaPredicted RBP20.67■□□□□ 0.9
HOXC11-201ENST00000243082 AKR1B15C9JRZ8 316 aaPredicted RBP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 ARHGAP6O43182 974 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 SLC26A4O43511 780 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 STX10O60499 249 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 EHHADHQ08426 723 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 BICDL2A1A5D9 508 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 RIOK3O14730 519 aaKnown RBP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 EEF1GP26641 437 aaKnown RBP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 GTF2F1P35269 517 aaKnown RBP eCLIP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 CREBRFQ8IUR6 639 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 NOC3LQ8WTT2 800 aaKnown RBP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 DNAJC19Q96DA6 116 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 ZNF341Q9BYN7 854 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
HOXC11-201ENST00000243082 KIAA1024Q9UPX6 916 aa20.66■□□□□ 0.9
HOXC11-201ENST00000243082 CFBP00751 764 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 PTGER2P43116 358 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 PPFIBP1Q86W92 1011 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 CSGALNACT2Q8N6G5 542 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 CYP2W1Q8TAV3 490 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 FAM20AQ96MK3 541 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 PANX2Q96RD6 677 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 POTEB3A0JP26 581 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 POTECB2RU33 542 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 E9PMD0 336 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 MSH4O15457 936 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 MED24O75448 989 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
HOXC11-201ENST00000243082 POTEBQ6S5H4 581 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 SEMA6BQ9H3T3 888 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 PAXBP1Q9Y5B6 917 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 GJA3Q9Y6H8 435 aa20.65■□□□□ 0.9
HOXC11-201ENST00000243082 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.89
HOXC11-201ENST00000243082 GYPCP04921 128 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 POLR2MP0CAP2 368 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 INPP5BP32019 993 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 CENPPQ6IPU0 288 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 MRPL11Q9Y3B7 192 aaKnown RBP20.64■□□□□ 0.89
HOXC11-201ENST00000243082 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
HOXC11-201ENST00000243082 IGLV3-22A0A075B6J6 115 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 DYNC1I1O14576 645 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 IDEP14735 1019 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 LDHDQ86WU2 507 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 CPLX3Q8WVH0 158 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 FEZ1Q99689 392 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 PLA2G4BP0C869 781 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 CASP14P31944 242 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 PSMD2Q13200 908 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 SAMD1Q6SPF0 538 aaPredicted RBP20.63■□□□□ 0.89
HOXC11-201ENST00000243082 CATSPER3Q86XQ3 398 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 DEFB129Q9H1M3 183 aa20.63■□□□□ 0.89
HOXC11-201ENST00000243082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.63■□□□□ 0.89
HOXC11-201ENST00000243082 CCP110O43303 1012 aa20.62■□□□□ 0.89
HOXC11-201ENST00000243082 CTNND1O60716 968 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms