RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 MRPL11Q9Y3B7 192 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PTK2Q05397 1052 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 FBXO18Q8NFZ0 1043 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CNOT6LQ96LI5 555 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CCDC138Q96M89 665 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 A0A087WWV3 80 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PDE6AP16499 860 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TFDP1Q14186 410 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 N4BP2L2Q92802 583 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PANX2Q96RD6 677 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 NOP53Q9NZM5 478 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CCNL1Q9UK58 526 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PNMA6EA0A0J9YXQ4 647 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 HNRNPCL2B2RXH8 293 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 HNRNPCL1O60812 293 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ACTN1P12814 892 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 TMOD1P28289 359 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CTSWP56202 376 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ART3Q13508 389 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 SNX1Q13596 522 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 XKR9Q5GH70 373 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 CMTR1Q8N1G2 835 aaKnown RBP7.31□□□□□ -1.24
CSMD2-201ENST00000241312 PNMA1Q8ND90 353 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 AK8Q96MA6 479 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ANO3Q9BYT9 981 aa7.31□□□□□ -1.24
CSMD2-201ENST00000241312 ASXL2Q76L83 1435 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ATP8B3O60423 1300 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 hCG_1984214I3L0E3 225 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 IPO5O00410 1097 aaKnown RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 NDUFA8P51970 172 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SPOPLQ6IQ16 392 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 TAB3Q8N5C8 712 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF713Q8N859 430 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SLC39A2Q9NP94 309 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ANGPTL3Q9Y5C1 460 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 KNL1Q8NG31 2342 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 DCTN3O75935 186 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ODR4Q5SWX8 454 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 LARP4BQ92615 738 aaKnown RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 MAGOHBQ96A72 148 aaKnown RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 FOXP1Q9H334 677 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 MAP3K19Q56UN5 1328 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 TRPA1O75762 1119 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 FOSP01100 380 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ATP2B4P23634 1241 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 C16orf87Q6PH81 154 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 BBS5Q8N3I7 341 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 CABLES1Q8TDN4 633 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 KLHL29Q96CT2 875 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PBKQ96KB5 322 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 CYP4F22Q6NT55 531 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SMCR8Q8TEV9 937 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZNF653Q96CK0 615 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 KRT82Q9NSB4 513 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 LCMT1Q9UIC8 334 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PCDHA12Q9UN75 941 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ADCY2Q08462 1091 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 TESPA1A2RU30 521 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SPAG7O75391 227 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZMYND10O75800 440 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ATP5HO75947 161 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ATP6V1E1P36543 226 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 NIM1KQ8IY84 436 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 C19orf44Q9H6X5 657 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 DISC1Q9NRI5 854 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ATG16L1Q676U5 607 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SCYL2Q6P3W7 929 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 RFX6Q8HWS3 928 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SUCLG2Q96I99 432 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 POC1B-GALNT4F8VUJ3 575 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PMLP29590 882 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PTGDRQ13258 359 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZMYND12Q9H0C1 365 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 ZSWIM6Q9HCJ5 1215 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 KCNA4P22459 653 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 POLGP54098 1239 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 FAM160B1Q5W0V3 765 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SORBS3O60504 671 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 CLCN6P51797 869 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PLTPP55058 493 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 DR1Q01658 176 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 FAM133BQ5BKY9 247 aaKnown RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 LCA5Q86VQ0 697 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PDIK1LQ8N165 341 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 DHX38Q92620 1227 aaKnown RBP7.3□□□□□ -1.24
CSMD2-201ENST00000241312 TTC1Q99614 292 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 EPB41L5Q9HCM4 733 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 CCDC87Q9NVE4 849 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 SLC13A4Q9UKG4 626 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 PYCARDQ9ULZ3 195 aa7.3□□□□□ -1.24
CSMD2-201ENST00000241312 TECP42680 631 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MCUQ8NE86 351 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 TNKSO95271 1327 aa7.29□□□□□ -1.24
CSMD2-201ENST00000241312 MAPK4P31152 587 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms