RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GRB10Q13322 594 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 TREML2Q5T2D2 321 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 LDLRAD1Q5T700 205 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 PRRT2Q7Z6L0 340 aaPredicted RBP17.14■□□□□ 0.33
HDHD3-201ENST00000238379 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 NUDT12Q9BQG2 462 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
HDHD3-201ENST00000238379 ZNF76P36508 570 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 UBXN2AP68543 259 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 TMEM132BQ14DG7 1078 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
HDHD3-201ENST00000238379 AOPEPQ8N6M6 819 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 SYTL5Q8TDW5 730 aaPredicted RBP17.13■□□□□ 0.33
HDHD3-201ENST00000238379 CALML4Q96GE6 196 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 UIMC1Q96RL1 719 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
HDHD3-201ENST00000238379 TRAF5O00463 557 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 MSH4O15457 936 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 CUL4BQ13620 913 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 SNRNP48Q6IEG0 339 aaKnown RBP17.12■□□□□ 0.33
HDHD3-201ENST00000238379 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
HDHD3-201ENST00000238379 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 MAGEF1Q9HAY2 307 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
HDHD3-201ENST00000238379 BECN2A8MW95 431 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 ADCY5O95622 1261 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
HDHD3-201ENST00000238379 RPS6P62753 249 aaKnown RBP17.12■□□□□ 0.33
HDHD3-201ENST00000238379 PPIL2Q13356 520 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 MLKLQ8NB16 471 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 RABGAP1Q9Y3P9 1069 aa17.12■□□□□ 0.33
HDHD3-201ENST00000238379 MEIS1O00470 390 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDHD3-201ENST00000238379 CEP55Q53EZ4 464 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 STK17AQ9UEE5 414 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 LOC285556D6RIA3 1793 aa17.11■□□□□ 0.33
HDHD3-201ENST00000238379 MYL1P05976 194 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 NCAPHQ15003 741 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 HYIQ5T013 277 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 IKBKBO14920 756 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 STAT3P40763 770 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 MOGSQ13724 837 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 ECM1Q16610 540 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 CDK5RAP3Q96JB5 506 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
HDHD3-201ENST00000238379 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
HDHD3-201ENST00000238379 SLC26A4O43511 780 aa17.09■□□□□ 0.33
HDHD3-201ENST00000238379 RPN1P04843 607 aaKnown RBP17.09■□□□□ 0.33
HDHD3-201ENST00000238379 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
HDHD3-201ENST00000238379 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
HDHD3-201ENST00000238379 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
HDHD3-201ENST00000238379 UNCXA6NJT0 531 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 SMTNL1A8MU46 457 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 ITGB5P18084 799 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 CCT6AP40227 531 aaKnown RBP17.08■□□□□ 0.33
HDHD3-201ENST00000238379 BAATQ14032 418 aaPredicted RBP17.08■□□□□ 0.33
HDHD3-201ENST00000238379 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 KCNK18Q7Z418 384 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 SLC5A5Q92911 643 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 TRIM9Q9C026 710 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 DACH1Q9UI36 760 aa17.08■□□□□ 0.33
HDHD3-201ENST00000238379 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
HDHD3-201ENST00000238379 KLRC4O43908 158 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 PSMD10O75832 226 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 ARP10275 920 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 GJA5P36382 358 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 MYL5Q02045 173 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 SARM1Q6SZW1 724 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 LARP4BQ92615 738 aaKnown RBP17.07■□□□□ 0.32
HDHD3-201ENST00000238379 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 MAF1Q9H063 256 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
HDHD3-201ENST00000238379 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms