RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 BMPR1AP36894 532 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 UBALD2Q8IYN6 164 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 SMRP1Q8NCR6 262 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 DBF4BQ8NFT6 615 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 PPP1R13LQ8WUF5 828 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 MKL1Q969V6 931 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 RMDN1Q96DB5 314 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 KATNAL1Q9BW62 490 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 IFIH1Q9BYX4 1025 aaKnown RBP11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 MFSD1Q9H3U5 465 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
NDUFB3-201ENST00000237889 FSD2A1L4K1 749 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 ATF7P17544 494 aaPredicted RBP11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 RRP1P56182 461 aaKnown RBP11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 SLFN13Q68D06 897 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 ARHGAP45Q92619 1136 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 MSLNLQ96KJ4 702 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 PLVAPQ9BX97 442 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 MYH1P12882 1939 aa11.47□□□□□ -0.57
NDUFB3-201ENST00000237889 CHD8Q9HCK8 2581 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 CYP2D7A0A087X1C5 515 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 TTLL1O95922 423 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 SDHBP21912 280 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 ALDH5A1P51649 535 aaPredicted RBP11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 MTMR3Q13615 1198 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 ZNF618Q5T7W0 954 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 PNMA2Q9UL42 364 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 CCPG1Q9ULG6 757 aa11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 USP15Q9Y4E8 981 aaPredicted RBP11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 DDX49Q9Y6V7 483 aaKnown RBP11.46□□□□□ -0.57
NDUFB3-201ENST00000237889 FOCADQ5VW36 1801 aa11.46□□□□□ -0.58
NDUFB3-201ENST00000237889 COL4A4P53420 1690 aaPredicted RBP11.46□□□□□ -0.58
NDUFB3-201ENST00000237889 GRM6O15303 877 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 LINC01565O15544 149 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 PRKAB2O43741 272 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 MBD4O95243 580 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 LMNAP02545 664 aaKnown RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 SRGAP2BP0DMP2 458 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 SLC1A4P43007 532 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 CLCN5P51795 746 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 BAATQ14032 418 aaPredicted RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 DGKDQ16760 1214 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 DHX38Q92620 1227 aaKnown RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 APBB2Q92870 758 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 SLC4A4Q9Y6R1 1079 aa11.45□□□□□ -0.58
NDUFB3-201ENST00000237889 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 PTPDC1A2A3K4 754 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 PLA2G6O60733 806 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 GH1P01241 217 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 MMP1P03956 469 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 THPOP40225 353 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 ST3GAL2Q16842 350 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 TCTN1Q2MV58 587 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 NAALADL2Q58DX5 795 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 PLEKHG4Q58EX7 1191 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 ERC1Q8IUD2 1116 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 KIAA2013Q8IYS2 634 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 AFG1LQ8WV93 481 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 CTAGE1Q96RT6 745 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 MTMR4Q9NYA4 1195 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 NR2E1Q9Y466 385 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 GVINP1Q7Z2Y8 2422 aa11.44□□□□□ -0.58
NDUFB3-201ENST00000237889 CDK5RAP2Q96SN8 1893 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 TCRBV5S4A2TA0A5A2 114 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 GOLIM4O00461 696 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 MAP3K13O43283 966 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 RASA1P20936 1047 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 GTF2F1P35269 517 aaKnown RBP eCLIP11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 MUM1L1Q5H9M0 696 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 AACSQ86V21 672 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 TMEM105Q8N8V8 129 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 KREMEN2Q8NCW0 462 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 DNERQ8NFT8 737 aa11.43□□□□□ -0.58
NDUFB3-201ENST00000237889 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms