RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 USP49Q70CQ1 688 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 PTF1AQ7RTS3 328 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 TAX1BP1Q86VP1 789 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 OGFOD1Q8N543 542 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 KCNN1Q92952 543 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 DHTKD1Q96HY7 919 aaPredicted RBP6.96□□□□□ -1.29
SGIP1-201ENST00000237247 RBM41Q96IZ5 413 aaKnown RBP6.96□□□□□ -1.29
SGIP1-201ENST00000237247 RSRC1Q96IZ7 334 aaKnown RBP6.96□□□□□ -1.29
SGIP1-201ENST00000237247 MMADHCQ9H3L0 296 aaPredicted RBP6.96□□□□□ -1.29
SGIP1-201ENST00000237247 FAM204AQ9H8W3 233 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 CABP5Q9NP86 173 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 FAM184BQ9ULE4 1060 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 ATP8B3O60423 1300 aa6.96□□□□□ -1.29
SGIP1-201ENST00000237247 KRT86O43790 486 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 IDH1O75874 414 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 RHOBTB3O94955 611 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 RPN1P04843 607 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 TM4SF1P30408 202 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 KRT9P35527 623 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 PABPC4Q13310 644 aaKnown RBP eCLIP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CAPRIN2Q6IMN6 1127 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CCNI2Q6ZMN8 369 aaPredicted RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 C4orf32Q8N8J7 132 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 NELFBQ8WX92 580 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 MYL10Q9BUA6 226 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 EBF2Q9HAK2 575 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CNNM1Q9NRU3 951 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 OTOFQ9HC10 1997 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 MYO1FO00160 1098 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 MEFVO15553 781 aaPredicted RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 PAPOLAP51003 745 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 AKAP17AQ02040 695 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CTDSPL2Q05D32 466 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 PPFIA1Q13136 1202 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 DBN1Q16643 649 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 GLE1Q53GS7 698 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 SPECC1Q5M775 1068 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 ALS2CLQ60I27 953 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 GALNT17Q6IS24 598 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 FAM114A1Q8IWE2 563 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 GALNT15Q8N3T1 639 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 EIF1ADQ8N9N8 165 aaKnown RBP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CERKQ8TCT0 537 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 ERGIC2Q96RQ1 377 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 EDEM3Q9BZQ6 932 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 CCSER1Q9C0I3 900 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
SGIP1-201ENST00000237247 TMEM98Q9Y2Y6 226 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 TNKSO95271 1327 aa6.96□□□□□ -1.3
SGIP1-201ENST00000237247 A0A0U1RQJ8 604 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 F8VZ95 297 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 MGRN1O60291 552 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 N4BP1O75113 896 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RNF8O76064 485 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 STARD3NLO95772 234 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RPL13P26373 211 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 CALML3P27482 149 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ACTN3Q08043 901 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 IFFO1Q0D2I5 559 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 STIM1Q13586 685 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RASGRF1Q13972 1273 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 SNCBQ16143 134 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 WDR59Q6PJI9 974 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 SAMD3Q8N6K7 520 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 MAGEB6Q8N7X4 407 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 SMCR8Q8TEV9 937 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ATRIPQ8WXE1 791 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 EPSTI1Q96J88 318 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 NUP88Q99567 741 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 UBAC1Q9BSL1 405 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 POLR3CQ9BUI4 534 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RNF14Q9UBS8 474 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ABCF2Q9UG63 623 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 BAZ2AQ9UIF9 1905 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 UBE2Q2LH0YL09 131 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 PJA2O43164 708 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 PARP1P09874 1014 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 TROAPQ12815 778 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 IFT88Q13099 833 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ZNF280DQ6N043 979 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC70Q6NSX1 233 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 EMBQ6PCB8 327 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 FAM228AQ86W67 206 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 LCORLQ8N3X6 602 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 MREGQ8N565 214 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 ANKS1AQ92625 1134 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 MTRQ99707 1265 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 LUC7L2Q9Y383 392 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 A6NHS1 94 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 IRS4O14654 1257 aaPredicted RBP6.95□□□□□ -1.3
SGIP1-201ENST00000237247 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
SGIP1-201ENST00000237247 VAV2P52735 878 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms