RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CNNM4Q6P4Q7 775 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 HAS1Q92839 578 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 AK8Q96MA6 479 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 ADAM21Q9UKJ8 722 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 FAN1Q9Y2M0 1017 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CAPN6Q9Y6Q1 641 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 NRAPQ86VF7 1730 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 A0A1W2PQC6 194 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 LRRC53A6NM62 1247 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 POTECB2RU33 542 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 GDF11O95390 407 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CYP2C19P33261 490 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 ZBED6P86452 979 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 SLC7A5Q01650 507 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 PPARDQ03181 441 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 VWA3BQ502W6 1294 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CDC42EP5Q6NZY7 148 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 TRIM34Q9BYJ4 488 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 HAUS4Q9H6D7 363 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 PSTPIP2Q9H939 334 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 SALL4Q9UJQ4 1053 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 L1RE1Q9UN81 338 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 COL5A3P25940 1745 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 AKR1B10O60218 316 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 BBOX1O75936 387 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 MYBL2P10244 700 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 PLCG2P16885 1265 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 SHMT1P34896 483 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CYLC1P35663 651 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 GFPT1Q06210 699 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 IKQ13123 557 aaPredicted RBP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CASP8Q14790 479 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 BRD3Q15059 726 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 TMEM266Q2M3C6 531 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 TRAPPC11Q7Z392 1133 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.78
SYDE2-201ENST00000234668 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
SYDE2-201ENST00000234668 PPEF1O14829 653 aaPredicted RBP10.16□□□□□ -0.78
SYDE2-201ENST00000234668 KRT86O43790 486 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 TTLL1O95922 423 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 RASSF7Q02833 373 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 KIF5AQ12840 1032 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 CENPPQ6IPU0 288 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 SPICE1Q8N0Z3 855 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 RAD54LQ92698 747 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 CCDC88AQ3V6T2 1871 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 WNK3Q9BYP7 1800 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 PSMC6P62333 389 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 KRT83P78385 493 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 GABPAQ06546 454 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 SPA17Q15506 151 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 WHAMMP3Q1A5X7 153 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 TDRD12Q587J7 1177 aaKnown RBP10.16□□□□□ -0.78
SYDE2-201ENST00000234668 NFRKBQ6P4R8 1299 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 UNC13DQ70J99 1090 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 HDXQ7Z353 690 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 CACNA2D4Q7Z3S7 1137 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 P2RX7Q99572 595 aaKnown RBP10.16□□□□□ -0.78
SYDE2-201ENST00000234668 IFIH1Q9BYX4 1025 aaKnown RBP10.16□□□□□ -0.78
SYDE2-201ENST00000234668 UBXN6Q9BZV1 441 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 RREB1Q92766 1687 aa10.16□□□□□ -0.78
SYDE2-201ENST00000234668 CASZ1Q86V15 1759 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 POTEFA5A3E0 1075 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 DDTLA6NHG4 134 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 MAP2K7O14733 419 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 HERC4Q5GLZ8 1057 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 POTEGQ6S5H5 508 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 POTEEQ6S8J3 1075 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 MSANTD4Q8NCY6 345 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 CYP2W1Q8TAV3 490 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PANK4Q9NVE7 773 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PCDHA1Q9Y5I3 950 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 GAKO14976 1311 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PNMA6FA0A0J9YX94 578 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 POLRMTO00411 1230 aaKnown RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 HOXA13P31271 388 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 KIF11P52732 1056 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 SEPT2Q15019 361 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 MEA1Q16626 185 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 CCDC40Q4G0X9 1142 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 APOBEC3HQ6NTF7 200 aaKnown RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 PROCA1Q8NCQ7 364 aaPredicted RBP10.15□□□□□ -0.78
SYDE2-201ENST00000234668 MS4A14Q96JA4 679 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 RABEP2Q9H5N1 569 aa10.15□□□□□ -0.78
SYDE2-201ENST00000234668 DNAJC18Q9H819 358 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms