RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 IFT20Q8IY31 132 aa17.44■□□□□ 0.38
DDX1-201ENST00000233084 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
DDX1-201ENST00000233084 SEC16BQ96JE7 1060 aa17.44■□□□□ 0.38
DDX1-201ENST00000233084 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
DDX1-201ENST00000233084 PLAAQ9Y263 795 aa17.44■□□□□ 0.38
DDX1-201ENST00000233084 MYH13Q9UKX3 1938 aa17.44■□□□□ 0.38
DDX1-201ENST00000233084 MYH10P35580 1976 aa17.44■□□□□ 0.38
DDX1-201ENST00000233084 PPP1R7Q15435 360 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 ZNF174Q15697 407 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 ODF2Q5BJF6 829 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 WASF1Q92558 559 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 CCDC42Q96M95 316 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 SPATS2LQ9NUQ6 558 aaKnown RBP17.43■□□□□ 0.38
DDX1-201ENST00000233084 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 LGALS16A8MUM7 142 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 PMS1P54277 932 aaKnown RBP17.43■□□□□ 0.38
DDX1-201ENST00000233084 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
DDX1-201ENST00000233084 PARD3BQ8TEW8 1205 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 LMBR1Q8WVP7 490 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 IFIH1Q9BYX4 1025 aaKnown RBP17.43■□□□□ 0.38
DDX1-201ENST00000233084 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
DDX1-201ENST00000233084 L3MBTL1Q9Y468 752 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 WDR19Q8NEZ3 1342 aa17.43■□□□□ 0.38
DDX1-201ENST00000233084 GOLGA6L10A6NI86 522 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 ATP6V1G2O95670 118 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 KCNB1Q14721 858 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 NUP133Q8WUM0 1156 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 TCP11Q8WWU5 503 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 ZBTB10Q96DT7 871 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 PURBQ96QR8 312 aaKnown RBP17.42■□□□□ 0.38
DDX1-201ENST00000233084 HYOU1Q9Y4L1 999 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
DDX1-201ENST00000233084 CHRNDQ07001 517 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 AP1ARQ63HQ0 302 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 TYW1BQ6NUM6 668 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
DDX1-201ENST00000233084 CACNA2D3Q8IZS8 1091 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX1-201ENST00000233084 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 GGA2Q9UJY4 613 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 AKAP11Q9UKA4 1901 aa17.42■□□□□ 0.38
DDX1-201ENST00000233084 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 HMGB1P1B2RPK0 211 aaPredicted RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 AP1G2O75843 785 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 FGFR2P21802 821 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 RPS8P62241 208 aaKnown RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 PAK2Q13177 524 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 MEA1Q16626 185 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 PNMA8AQ86V59 439 aaPredicted RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 MTRQ99707 1265 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 USO1O60763 962 aaKnown RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 ZFYP08048 801 aaPredicted RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 CLTAP09496 248 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 IFNAR1P17181 557 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 ELF3P78545 371 aaPredicted RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 CTDSPL2Q05D32 466 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 MAGEC3Q8TD91 643 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 SNAP23O00161 211 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 BUB1O43683 1085 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 TCP1P17987 556 aaKnown RBP17.41■□□□□ 0.38
DDX1-201ENST00000233084 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
DDX1-201ENST00000233084 EIF4E1BA6NMX2 242 aaKnown RBP17.4■□□□□ 0.38
DDX1-201ENST00000233084 MGRN1O60291 552 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
DDX1-201ENST00000233084 RTN1Q16799 776 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 GLE1Q53GS7 698 aaKnown RBP17.4■□□□□ 0.38
DDX1-201ENST00000233084 PPP4R3AQ6IN85 833 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 CPLX4Q7Z7G2 160 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 ZNF507Q8TCN5 953 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 MICAL1Q8TDZ2 1067 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 CASKIN2Q8WXE0 1202 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 RUBCNQ92622 972 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 TRIM47Q96LD4 638 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 KRT12Q99456 494 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 SH2D4AQ9H788 454 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 MINPP1Q9UNW1 487 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 PRDM1O75626 825 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 SLC8A3P57103 927 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 IFFO1Q0D2I5 559 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 XRCC4Q13426 336 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 HLTFQ14527 1009 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDX1-201ENST00000233084 NBPF20Q3BBV1 942 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 CCDC170Q8IYT3 715 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 CUL5Q93034 780 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 MAGEC2Q9UBF1 373 aaPredicted RBP17.4■□□□□ 0.38
DDX1-201ENST00000233084 PCDHA13Q9Y5I0 950 aa17.4■□□□□ 0.38
DDX1-201ENST00000233084 CACNA1SQ13698 1873 aa17.39■□□□□ 0.38
DDX1-201ENST00000233084 STK36Q9NRP7 1315 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 KLHL33A6NCF5 533 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 ITIH3Q06033 890 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 GRAPQ13588 217 aa17.39■□□□□ 0.37
DDX1-201ENST00000233084 BYSLQ13895 437 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms